Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 PRYP5-201ENST00000451909 266 ntBASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 KRT18P21-201ENST00000515767 1272 ntBASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 AL353135.1-201ENST00000606729 504 ntBASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-7A0A0A0MS04 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 TNRC18P2-201ENST00000417666 2714 ntBASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 AC099336.1-202ENST00000602961 463 ntBASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 NPAP1P7-201ENST00000613027 823 ntBASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 AL596087.1-201ENST00000400979 1969 ntBASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-7A0A0A0MS04 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-7A0A0A0MS04 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms