Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX11Q9Y6N1 LINC00273-201ENST00000539813 1452 ntBASIC17.26■□□□□ 0.35
COX11Q9Y6N1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.26■□□□□ 0.35
COX11Q9Y6N1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX11Q9Y6N1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX11Q9Y6N1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.26■□□□□ 0.35
COX11Q9Y6N1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX11Q9Y6N1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COX11Q9Y6N1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COX11Q9Y6N1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 C1orf229-201ENST00000623686 2258 ntBASIC17.24■□□□□ 0.35
COX11Q9Y6N1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX11Q9Y6N1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 ZNRF2P2-203ENST00000454624 420 ntBASIC17.23■□□□□ 0.35
COX11Q9Y6N1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 LINC01971-201ENST00000617888 1048 ntBASIC17.23■□□□□ 0.35
COX11Q9Y6N1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COX11Q9Y6N1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX11Q9Y6N1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX11Q9Y6N1 AC142381.3-201ENST00000568208 1670 ntBASIC17.22■□□□□ 0.35
COX11Q9Y6N1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX11Q9Y6N1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COX11Q9Y6N1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COX11Q9Y6N1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 LINC00565-201ENST00000562710 2331 ntBASIC17.2■□□□□ 0.34
COX11Q9Y6N1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COX11Q9Y6N1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COX11Q9Y6N1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COX11Q9Y6N1 AL117328.2-201ENST00000624617 1940 ntBASIC17.17■□□□□ 0.34
COX11Q9Y6N1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms