Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB11Q9Y5F2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHB11Q9Y5F2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB11Q9Y5F2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB11Q9Y5F2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB11Q9Y5F2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB11Q9Y5F2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB11Q9Y5F2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB11Q9Y5F2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB11Q9Y5F2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB11Q9Y5F2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 AC009299.2-201ENST00000482477 511 ntBASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDHB11Q9Y5F2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB11Q9Y5F2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB11Q9Y5F2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB11Q9Y5F2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
PCDHB11Q9Y5F2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB11Q9Y5F2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB11Q9Y5F2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB11Q9Y5F2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PCDHB11Q9Y5F2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHB11Q9Y5F2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB11Q9Y5F2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHB11Q9Y5F2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB11Q9Y5F2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB11Q9Y5F2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHB11Q9Y5F2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB11Q9Y5F2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHB11Q9Y5F2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.32■■□□□ 1.32
PCDHB11Q9Y5F2 AC092803.2-201ENST00000564287 1899 ntBASIC23.32■■□□□ 1.32
PCDHB11Q9Y5F2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHB11Q9Y5F2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB11Q9Y5F2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB11Q9Y5F2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB11Q9Y5F2 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB11Q9Y5F2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDHB11Q9Y5F2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB11Q9Y5F2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 DUSP8P4-201ENST00000399538 1761 ntBASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB11Q9Y5F2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB11Q9Y5F2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PCDHB11Q9Y5F2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB11Q9Y5F2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB11Q9Y5F2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB11Q9Y5F2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB11Q9Y5F2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHB11Q9Y5F2 AC103834.1-201ENST00000520383 144 ntBASIC23.28■■□□□ 1.32
PCDHB11Q9Y5F2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB11Q9Y5F2 AC131212.1-201ENST00000613771 668 ntBASIC23.28■■□□□ 1.32
PCDHB11Q9Y5F2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHB11Q9Y5F2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB11Q9Y5F2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB11Q9Y5F2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB11Q9Y5F2 AL592295.1-201ENST00000400984 884 ntBASIC23.27■■□□□ 1.32
PCDHB11Q9Y5F2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB11Q9Y5F2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB11Q9Y5F2 MIR4508-201ENST00000584178 70 ntBASIC23.27■■□□□ 1.32
PCDHB11Q9Y5F2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDHB11Q9Y5F2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB11Q9Y5F2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
PCDHB11Q9Y5F2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB11Q9Y5F2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB11Q9Y5F2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB11Q9Y5F2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB11Q9Y5F2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB11Q9Y5F2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHB11Q9Y5F2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHB11Q9Y5F2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB11Q9Y5F2 PVT1_1.1-201ENST00000615125 194 ntBASIC23.24■■□□□ 1.31
PCDHB11Q9Y5F2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms