Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 AL139125.2-201ENST00000623134 1869 ntBASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPH3ALQ9UNE2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3ALQ9UNE2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPH3ALQ9UNE2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
RPH3ALQ9UNE2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 AP006261.1-201ENST00000584783 668 ntBASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 AC087741.3-201ENST00000624270 1347 ntBASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3ALQ9UNE2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 AC044849.2-201ENST00000606596 710 ntBASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.38■□□□□ 0.53
RPH3ALQ9UNE2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3ALQ9UNE2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3ALQ9UNE2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 AC096887.2-201ENST00000623443 1957 ntBASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3ALQ9UNE2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RPH3ALQ9UNE2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.33■□□□□ 0.53
RPH3ALQ9UNE2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3ALQ9UNE2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3ALQ9UNE2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RPH3ALQ9UNE2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3ALQ9UNE2 AC021231.2-201ENST00000594613 730 ntBASIC18.33■□□□□ 0.52
RPH3ALQ9UNE2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPH3ALQ9UNE2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
RPH3ALQ9UNE2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.33■□□□□ 0.52
RPH3ALQ9UNE2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPH3ALQ9UNE2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3ALQ9UNE2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RPH3ALQ9UNE2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.32■□□□□ 0.52
RPH3ALQ9UNE2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPH3ALQ9UNE2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms