Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPAP1Q9NZP6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
NPAP1Q9NZP6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAP1Q9NZP6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAP1Q9NZP6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.56■■□□□ 1.04
NPAP1Q9NZP6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPAP1Q9NZP6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPAP1Q9NZP6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAP1Q9NZP6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPAP1Q9NZP6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPAP1Q9NZP6 AC007029.1-201ENST00000604183 313 ntBASIC21.55■■□□□ 1.04
NPAP1Q9NZP6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NPAP1Q9NZP6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPAP1Q9NZP6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NPAP1Q9NZP6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.54■■□□□ 1.04
NPAP1Q9NZP6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAP1Q9NZP6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPAP1Q9NZP6 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.54■■□□□ 1.04
NPAP1Q9NZP6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 SMPD5-203ENST00000639008 1464 ntBASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.53■■□□□ 1.04
NPAP1Q9NZP6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPAP1Q9NZP6 AC068473.5-201ENST00000616428 2072 ntBASIC21.52■■□□□ 1.04
NPAP1Q9NZP6 AC092803.2-201ENST00000564287 1899 ntBASIC21.52■■□□□ 1.04
NPAP1Q9NZP6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.52■■□□□ 1.04
NPAP1Q9NZP6 AC025884.2-201ENST00000553429 711 ntBASIC21.52■■□□□ 1.04
NPAP1Q9NZP6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPAP1Q9NZP6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NPAP1Q9NZP6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NPAP1Q9NZP6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPAP1Q9NZP6 WHAMMP3-201ENST00000611636 1609 ntBASIC21.51■■□□□ 1.03
NPAP1Q9NZP6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.51■■□□□ 1.03
NPAP1Q9NZP6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.51■■□□□ 1.03
NPAP1Q9NZP6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPAP1Q9NZP6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPAP1Q9NZP6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.51■■□□□ 1.03
NPAP1Q9NZP6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPAP1Q9NZP6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPAP1Q9NZP6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPAP1Q9NZP6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPAP1Q9NZP6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPAP1Q9NZP6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NPAP1Q9NZP6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAP1Q9NZP6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
NPAP1Q9NZP6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAP1Q9NZP6 KRT18P60-201ENST00000312876 1297 ntBASIC21.48■■□□□ 1.03
NPAP1Q9NZP6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NPAP1Q9NZP6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAP1Q9NZP6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 AC012354.3-201ENST00000623734 483 ntBASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAP1Q9NZP6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 AC009831.1-201ENST00000580420 1582 ntBASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NPAP1Q9NZP6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
NPAP1Q9NZP6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 AL359504.2-201ENST00000605506 1601 ntBASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NPAP1Q9NZP6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms