Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CUEDC1Q9NWM3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CUEDC1Q9NWM3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CUEDC1Q9NWM3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CUEDC1Q9NWM3 ATP5G2P3-201ENST00000429083 425 ntBASIC23.07■■□□□ 1.28
CUEDC1Q9NWM3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CUEDC1Q9NWM3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CUEDC1Q9NWM3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CUEDC1Q9NWM3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 AC004987.1-201ENST00000428627 508 ntBASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CUEDC1Q9NWM3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CUEDC1Q9NWM3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CUEDC1Q9NWM3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CUEDC1Q9NWM3 AC018755.3-202ENST00000596210 929 ntBASIC23.05■■□□□ 1.28
CUEDC1Q9NWM3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CUEDC1Q9NWM3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CUEDC1Q9NWM3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.05■■□□□ 1.28
CUEDC1Q9NWM3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 DUX4L18-201ENST00000553347 1267 ntBASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.04■■□□□ 1.28
CUEDC1Q9NWM3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 MIR6765-201ENST00000614092 87 ntBASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CUEDC1Q9NWM3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CUEDC1Q9NWM3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CUEDC1Q9NWM3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CUEDC1Q9NWM3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CUEDC1Q9NWM3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CUEDC1Q9NWM3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CUEDC1Q9NWM3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CUEDC1Q9NWM3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23■■□□□ 1.27
CUEDC1Q9NWM3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23■■□□□ 1.27
CUEDC1Q9NWM3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CUEDC1Q9NWM3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CUEDC1Q9NWM3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CUEDC1Q9NWM3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CUEDC1Q9NWM3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CUEDC1Q9NWM3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CUEDC1Q9NWM3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CUEDC1Q9NWM3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CUEDC1Q9NWM3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CUEDC1Q9NWM3 AC097639.1-201ENST00000565519 1891 ntBASIC22.98■■□□□ 1.27
CUEDC1Q9NWM3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CUEDC1Q9NWM3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CUEDC1Q9NWM3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CUEDC1Q9NWM3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.97■■□□□ 1.27
CUEDC1Q9NWM3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CUEDC1Q9NWM3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.97■■□□□ 1.27
CUEDC1Q9NWM3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 RPS2P7-201ENST00000447334 885 ntBASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CUEDC1Q9NWM3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CUEDC1Q9NWM3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
CUEDC1Q9NWM3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CUEDC1Q9NWM3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.95■■□□□ 1.26
CUEDC1Q9NWM3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CUEDC1Q9NWM3 AC019069.1-201ENST00000610008 1333 ntBASIC22.94■■□□□ 1.26
CUEDC1Q9NWM3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms