Protein–RNA interactions for Protein: Q9NVV0

TMEM38B, Trimeric intracellular cation channel type B, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38BQ9NVV0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM38BQ9NVV0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM38BQ9NVV0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21■□□□□ 0.95
TMEM38BQ9NVV0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM38BQ9NVV0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM38BQ9NVV0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21■□□□□ 0.95
TMEM38BQ9NVV0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM38BQ9NVV0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21■□□□□ 0.95
TMEM38BQ9NVV0 SPCS2P3-201ENST00000500401 656 ntBASIC21■□□□□ 0.95
TMEM38BQ9NVV0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TMEM38BQ9NVV0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM38BQ9NVV0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TMEM38BQ9NVV0 AC018755.3-202ENST00000596210 929 ntBASIC20.99■□□□□ 0.95
TMEM38BQ9NVV0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM38BQ9NVV0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM38BQ9NVV0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM38BQ9NVV0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMEM38BQ9NVV0 DUX4L9-201ENST00000449051 1259 ntBASIC20.98■□□□□ 0.95
TMEM38BQ9NVV0 AC129492.7-201ENST00000622992 756 ntBASIC20.98■□□□□ 0.95
TMEM38BQ9NVV0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEM38BQ9NVV0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM38BQ9NVV0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM38BQ9NVV0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM38BQ9NVV0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM38BQ9NVV0 AC020928.2-201ENST00000588717 2197 ntBASIC20.96■□□□□ 0.95
TMEM38BQ9NVV0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.96■□□□□ 0.95
TMEM38BQ9NVV0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM38BQ9NVV0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM38BQ9NVV0 MIR6765-201ENST00000614092 87 ntBASIC20.96■□□□□ 0.95
TMEM38BQ9NVV0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM38BQ9NVV0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM38BQ9NVV0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TMEM38BQ9NVV0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38BQ9NVV0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TMEM38BQ9NVV0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38BQ9NVV0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38BQ9NVV0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38BQ9NVV0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TMEM38BQ9NVV0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38BQ9NVV0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM38BQ9NVV0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM38BQ9NVV0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM38BQ9NVV0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM38BQ9NVV0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TMEM38BQ9NVV0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.93■□□□□ 0.94
TMEM38BQ9NVV0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38BQ9NVV0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38BQ9NVV0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38BQ9NVV0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TMEM38BQ9NVV0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38BQ9NVV0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38BQ9NVV0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 RPS2P7-201ENST00000447334 885 ntBASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38BQ9NVV0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM38BQ9NVV0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TMEM38BQ9NVV0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM38BQ9NVV0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38BQ9NVV0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38BQ9NVV0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38BQ9NVV0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms