Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NELFAQ9H3P2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 SPCS2P3-201ENST00000500401 656 ntBASIC21.19■□□□□ 0.98
NELFAQ9H3P2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NELFAQ9H3P2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 AC129492.7-201ENST00000622992 756 ntBASIC21.18■□□□□ 0.98
NELFAQ9H3P2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
NELFAQ9H3P2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NELFAQ9H3P2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NELFAQ9H3P2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NELFAQ9H3P2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.16■□□□□ 0.98
NELFAQ9H3P2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NELFAQ9H3P2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.16■□□□□ 0.98
NELFAQ9H3P2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.16■□□□□ 0.98
NELFAQ9H3P2 AC020928.2-201ENST00000588717 2197 ntBASIC21.16■□□□□ 0.98
NELFAQ9H3P2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NELFAQ9H3P2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NELFAQ9H3P2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.15■□□□□ 0.98
NELFAQ9H3P2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NELFAQ9H3P2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NELFAQ9H3P2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NELFAQ9H3P2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NELFAQ9H3P2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 DUX4L9-201ENST00000449051 1259 ntBASIC21.14■□□□□ 0.97
NELFAQ9H3P2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
NELFAQ9H3P2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NELFAQ9H3P2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NELFAQ9H3P2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NELFAQ9H3P2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.12■□□□□ 0.97
NELFAQ9H3P2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NELFAQ9H3P2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 AC004987.1-201ENST00000428627 508 ntBASIC21.11■□□□□ 0.97
NELFAQ9H3P2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.11■□□□□ 0.97
NELFAQ9H3P2 AC012354.3-201ENST00000623734 483 ntBASIC21.11■□□□□ 0.97
NELFAQ9H3P2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFAQ9H3P2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.1■□□□□ 0.97
NELFAQ9H3P2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NELFAQ9H3P2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFAQ9H3P2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
NELFAQ9H3P2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFAQ9H3P2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFAQ9H3P2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.09■□□□□ 0.97
NELFAQ9H3P2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFAQ9H3P2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NELFAQ9H3P2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFAQ9H3P2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
NELFAQ9H3P2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.08■□□□□ 0.97
NELFAQ9H3P2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NELFAQ9H3P2 ATP5G2P3-201ENST00000429083 425 ntBASIC21.08■□□□□ 0.97
NELFAQ9H3P2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NELFAQ9H3P2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.08■□□□□ 0.97
NELFAQ9H3P2 AC097639.1-201ENST00000565519 1891 ntBASIC21.08■□□□□ 0.97
NELFAQ9H3P2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms