Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.73■■■□□ 2.51
CNTNAP4Q9C0A0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.73■■■□□ 2.51
CNTNAP4Q9C0A0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
CNTNAP4Q9C0A0 LINC01003-201ENST00000564834 1764 ntBASIC30.72■■■□□ 2.51
CNTNAP4Q9C0A0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CNTNAP4Q9C0A0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CNTNAP4Q9C0A0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.72■■■□□ 2.51
CNTNAP4Q9C0A0 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.72■■■□□ 2.51
CNTNAP4Q9C0A0 AL117332.1-201ENST00000622628 974 ntBASIC30.72■■■□□ 2.51
CNTNAP4Q9C0A0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.71■■■□□ 2.51
CNTNAP4Q9C0A0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CNTNAP4Q9C0A0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.7■■■□□ 2.51
CNTNAP4Q9C0A0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.7■■■□□ 2.5
CNTNAP4Q9C0A0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.7■■■□□ 2.5
CNTNAP4Q9C0A0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
CNTNAP4Q9C0A0 AC142472.1-201ENST00000612013 1741 ntBASIC30.69■■■□□ 2.5
CNTNAP4Q9C0A0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CNTNAP4Q9C0A0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.68■■■□□ 2.5
CNTNAP4Q9C0A0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CNTNAP4Q9C0A0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CNTNAP4Q9C0A0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
CNTNAP4Q9C0A0 AL136116.3-201ENST00000402907 1138 ntBASIC30.67■■■□□ 2.5
CNTNAP4Q9C0A0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.67■■■□□ 2.5
CNTNAP4Q9C0A0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CNTNAP4Q9C0A0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.66■■■□□ 2.5
CNTNAP4Q9C0A0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.66■■■□□ 2.5
CNTNAP4Q9C0A0 MIR3621-201ENST00000580529 85 ntBASIC30.66■■■□□ 2.5
CNTNAP4Q9C0A0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CNTNAP4Q9C0A0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CNTNAP4Q9C0A0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CNTNAP4Q9C0A0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CNTNAP4Q9C0A0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CNTNAP4Q9C0A0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CNTNAP4Q9C0A0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CNTNAP4Q9C0A0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CNTNAP4Q9C0A0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CNTNAP4Q9C0A0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.64■■■□□ 2.5
CNTNAP4Q9C0A0 AC010997.5-201ENST00000609182 354 ntBASIC30.64■■■□□ 2.5
CNTNAP4Q9C0A0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CNTNAP4Q9C0A0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.49
CNTNAP4Q9C0A0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CNTNAP4Q9C0A0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CNTNAP4Q9C0A0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
CNTNAP4Q9C0A0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.63■■■□□ 2.49
CNTNAP4Q9C0A0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.63■■■□□ 2.49
CNTNAP4Q9C0A0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.63■■■□□ 2.49
CNTNAP4Q9C0A0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 MIR6724-1-201ENST00000616420 92 ntBASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 MIR6724-2-201ENST00000616483 92 ntBASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 MIR6724-4-201ENST00000617390 92 ntBASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 AC110285.6-201ENST00000617652 491 ntBASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 MIR6724-3-201ENST00000622482 92 ntBASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CNTNAP4Q9C0A0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 AC011551.1-201ENST00000614101 683 ntBASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CNTNAP4Q9C0A0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.6■■■□□ 2.49
CNTNAP4Q9C0A0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
CNTNAP4Q9C0A0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.59■■■□□ 2.49
CNTNAP4Q9C0A0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.59■■■□□ 2.49
CNTNAP4Q9C0A0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CNTNAP4Q9C0A0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CNTNAP4Q9C0A0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CNTNAP4Q9C0A0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.58■■■□□ 2.49
CNTNAP4Q9C0A0 MTDHP2-201ENST00000601468 714 ntBASIC30.58■■■□□ 2.49
CNTNAP4Q9C0A0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.58■■■□□ 2.49
CNTNAP4Q9C0A0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CNTNAP4Q9C0A0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CNTNAP4Q9C0A0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.57■■■□□ 2.48
CNTNAP4Q9C0A0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.57■■■□□ 2.48
CNTNAP4Q9C0A0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CNTNAP4Q9C0A0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC30.56■■■□□ 2.48
CNTNAP4Q9C0A0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CNTNAP4Q9C0A0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.55■■■□□ 2.48
CNTNAP4Q9C0A0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CNTNAP4Q9C0A0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CNTNAP4Q9C0A0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CNTNAP4Q9C0A0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.54■■■□□ 2.48
CNTNAP4Q9C0A0 MIR4466-201ENST00000606121 54 ntBASIC30.54■■■□□ 2.48
CNTNAP4Q9C0A0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
CNTNAP4Q9C0A0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.54■■■□□ 2.48
CNTNAP4Q9C0A0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CNTNAP4Q9C0A0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CNTNAP4Q9C0A0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms