Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RNF5Q99942 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF5Q99942 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF5Q99942 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF5Q99942 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF5Q99942 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF5Q99942 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF5Q99942 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF5Q99942 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF5Q99942 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF5Q99942 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF5Q99942 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
RNF5Q99942 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF5Q99942 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.11■□□□□ 0.65
RNF5Q99942 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF5Q99942 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF5Q99942 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF5Q99942 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF5Q99942 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF5Q99942 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF5Q99942 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF5Q99942 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF5Q99942 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF5Q99942 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF5Q99942 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF5Q99942 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF5Q99942 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF5Q99942 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF5Q99942 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF5Q99942 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RNF5Q99942 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF5Q99942 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF5Q99942 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF5Q99942 AC142381.3-201ENST00000568208 1670 ntBASIC19.08■□□□□ 0.64
RNF5Q99942 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF5Q99942 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF5Q99942 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF5Q99942 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF5Q99942 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF5Q99942 AC018755.3-202ENST00000596210 929 ntBASIC19.06■□□□□ 0.64
RNF5Q99942 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF5Q99942 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF5Q99942 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF5Q99942 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF5Q99942 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF5Q99942 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF5Q99942 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF5Q99942 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF5Q99942 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF5Q99942 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF5Q99942 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF5Q99942 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF5Q99942 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF5Q99942 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF5Q99942 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF5Q99942 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF5Q99942 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF5Q99942 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF5Q99942 AL592293.1-201ENST00000502889 1188 ntBASIC19.04■□□□□ 0.64
RNF5Q99942 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF5Q99942 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF5Q99942 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF5Q99942 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF5Q99942 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF5Q99942 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF5Q99942 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF5Q99942 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF5Q99942 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF5Q99942 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF5Q99942 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
RNF5Q99942 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF5Q99942 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF5Q99942 AC022211.4-201ENST00000625094 2161 ntBASIC19.01■□□□□ 0.63
RNF5Q99942 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RNF5Q99942 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF5Q99942 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF5Q99942 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF5Q99942 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19■□□□□ 0.63
RNF5Q99942 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF5Q99942 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF5Q99942 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF5Q99942 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19■□□□□ 0.63
RNF5Q99942 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19■□□□□ 0.63
RNF5Q99942 ABHD17AP5-201ENST00000580133 923 ntBASIC19■□□□□ 0.63
RNF5Q99942 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNF5Q99942 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
RNF5Q99942 SLC6A10P-202ENST00000431994 2058 ntBASIC19■□□□□ 0.63
RNF5Q99942 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF5Q99942 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF5Q99942 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19■□□□□ 0.63
RNF5Q99942 AP003733.4-201ENST00000623785 1697 ntBASIC18.99■□□□□ 0.63
RNF5Q99942 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF5Q99942 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms