Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB40CQ96S21 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB40CQ96S21 AC141586.4-201ENST00000624558 1573 ntBASIC19.27■□□□□ 0.67
RAB40CQ96S21 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
RAB40CQ96S21 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40CQ96S21 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RAB40CQ96S21 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB40CQ96S21 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB40CQ96S21 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40CQ96S21 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40CQ96S21 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40CQ96S21 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40CQ96S21 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RAB40CQ96S21 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB40CQ96S21 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40CQ96S21 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40CQ96S21 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40CQ96S21 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB40CQ96S21 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB40CQ96S21 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RAB40CQ96S21 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB40CQ96S21 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40CQ96S21 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40CQ96S21 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40CQ96S21 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RAB40CQ96S21 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40CQ96S21 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40CQ96S21 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB40CQ96S21 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40CQ96S21 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB40CQ96S21 AC068473.5-201ENST00000616428 2072 ntBASIC19.23■□□□□ 0.67
RAB40CQ96S21 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB40CQ96S21 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40CQ96S21 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB40CQ96S21 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB40CQ96S21 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.22■□□□□ 0.67
RAB40CQ96S21 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40CQ96S21 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40CQ96S21 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40CQ96S21 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
RAB40CQ96S21 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB40CQ96S21 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB40CQ96S21 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB40CQ96S21 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40CQ96S21 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB40CQ96S21 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40CQ96S21 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40CQ96S21 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40CQ96S21 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB40CQ96S21 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40CQ96S21 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40CQ96S21 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40CQ96S21 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40CQ96S21 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40CQ96S21 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40CQ96S21 SLC6A10P-202ENST00000431994 2058 ntBASIC19.19■□□□□ 0.66
RAB40CQ96S21 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40CQ96S21 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40CQ96S21 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40CQ96S21 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40CQ96S21 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB40CQ96S21 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAB40CQ96S21 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB40CQ96S21 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RAB40CQ96S21 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAB40CQ96S21 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40CQ96S21 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40CQ96S21 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40CQ96S21 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAB40CQ96S21 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB40CQ96S21 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RAB40CQ96S21 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40CQ96S21 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB40CQ96S21 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB40CQ96S21 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40CQ96S21 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40CQ96S21 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40CQ96S21 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RAB40CQ96S21 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40CQ96S21 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40CQ96S21 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40CQ96S21 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40CQ96S21 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RAB40CQ96S21 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms