Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.8■■□□□ 1.4
SLC6A18Q96N87 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A18Q96N87 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.8■■□□□ 1.4
SLC6A18Q96N87 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC6A18Q96N87 BX664725.1-201ENST00000438252 379 ntBASIC23.79■■□□□ 1.4
SLC6A18Q96N87 KRT125P-201ENST00000546827 989 ntBASIC23.79■■□□□ 1.4
SLC6A18Q96N87 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC6A18Q96N87 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC6A18Q96N87 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
SLC6A18Q96N87 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A18Q96N87 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A18Q96N87 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A18Q96N87 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.78■■□□□ 1.4
SLC6A18Q96N87 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A18Q96N87 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
SLC6A18Q96N87 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A18Q96N87 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC6A18Q96N87 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC6A18Q96N87 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC6A18Q96N87 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SLC6A18Q96N87 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC6A18Q96N87 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.77■■□□□ 1.4
SLC6A18Q96N87 MIR4787-201ENST00000607364 84 ntBASIC23.77■■□□□ 1.4
SLC6A18Q96N87 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC6A18Q96N87 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC6A18Q96N87 KRT18P24-201ENST00000344739 1156 ntBASIC23.76■■□□□ 1.39
SLC6A18Q96N87 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC6A18Q96N87 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A18Q96N87 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SLC6A18Q96N87 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A18Q96N87 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A18Q96N87 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A18Q96N87 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A18Q96N87 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A18Q96N87 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 AC120024.1-201ENST00000562672 995 ntBASIC23.74■■□□□ 1.39
SLC6A18Q96N87 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A18Q96N87 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC6A18Q96N87 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A18Q96N87 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A18Q96N87 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.72■■□□□ 1.39
SLC6A18Q96N87 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.72■■□□□ 1.39
SLC6A18Q96N87 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A18Q96N87 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.72■■□□□ 1.39
SLC6A18Q96N87 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A18Q96N87 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A18Q96N87 UNC93B8-201ENST00000511903 705 ntBASIC23.7■■□□□ 1.38
SLC6A18Q96N87 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.7■■□□□ 1.38
SLC6A18Q96N87 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.69■■□□□ 1.38
SLC6A18Q96N87 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A18Q96N87 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SLC6A18Q96N87 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
SLC6A18Q96N87 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A18Q96N87 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.68■■□□□ 1.38
SLC6A18Q96N87 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A18Q96N87 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.67■■□□□ 1.38
SLC6A18Q96N87 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC6A18Q96N87 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A18Q96N87 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A18Q96N87 AC137630.3-201ENST00000607245 391 ntBASIC23.67■■□□□ 1.38
SLC6A18Q96N87 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC6A18Q96N87 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A18Q96N87 AC019069.1-201ENST00000610008 1333 ntBASIC23.66■■□□□ 1.38
SLC6A18Q96N87 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A18Q96N87 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A18Q96N87 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A18Q96N87 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.66■■□□□ 1.38
SLC6A18Q96N87 KRT16P3-201ENST00000439127 1283 ntBASIC23.66■■□□□ 1.38
SLC6A18Q96N87 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.66■■□□□ 1.38
SLC6A18Q96N87 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms