Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDCA5Q96FF9 MTDHP2-201ENST00000601468 714 ntBASIC28.54■■■□□ 2.16
CDCA5Q96FF9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDCA5Q96FF9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDCA5Q96FF9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
CDCA5Q96FF9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.53■■■□□ 2.16
CDCA5Q96FF9 AL356740.2-201ENST00000601559 647 ntBASIC28.53■■■□□ 2.16
CDCA5Q96FF9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDCA5Q96FF9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDCA5Q96FF9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDCA5Q96FF9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDCA5Q96FF9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CDCA5Q96FF9 AL449106.1-201ENST00000608517 1980 ntBASIC28.52■■■□□ 2.16
CDCA5Q96FF9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.52■■■□□ 2.16
CDCA5Q96FF9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
CDCA5Q96FF9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
CDCA5Q96FF9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.51■■■□□ 2.15
CDCA5Q96FF9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDCA5Q96FF9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CDCA5Q96FF9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.5■■■□□ 2.15
CDCA5Q96FF9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.5■■■□□ 2.15
CDCA5Q96FF9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDCA5Q96FF9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.5■■■□□ 2.15
CDCA5Q96FF9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.49■■■□□ 2.15
CDCA5Q96FF9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.49■■■□□ 2.15
CDCA5Q96FF9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.49■■■□□ 2.15
CDCA5Q96FF9 AC133561.4-201ENST00000566112 224 ntBASIC28.49■■■□□ 2.15
CDCA5Q96FF9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
CDCA5Q96FF9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
CDCA5Q96FF9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
CDCA5Q96FF9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.48■■■□□ 2.15
CDCA5Q96FF9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.48■■■□□ 2.15
CDCA5Q96FF9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.47■■■□□ 2.15
CDCA5Q96FF9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDCA5Q96FF9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.47■■■□□ 2.15
CDCA5Q96FF9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.47■■■□□ 2.15
CDCA5Q96FF9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.47■■■□□ 2.15
CDCA5Q96FF9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.46■■■□□ 2.15
CDCA5Q96FF9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.46■■■□□ 2.15
CDCA5Q96FF9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CDCA5Q96FF9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.46■■■□□ 2.15
CDCA5Q96FF9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CDCA5Q96FF9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDCA5Q96FF9 AL512631.2-201ENST00000604634 923 ntBASIC28.45■■■□□ 2.14
CDCA5Q96FF9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CDCA5Q96FF9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CDCA5Q96FF9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.44■■■□□ 2.14
CDCA5Q96FF9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.44■■■□□ 2.14
CDCA5Q96FF9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.44■■■□□ 2.14
CDCA5Q96FF9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.43■■■□□ 2.14
CDCA5Q96FF9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
CDCA5Q96FF9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.43■■■□□ 2.14
CDCA5Q96FF9 AC092666.2-201ENST00000613287 246 ntBASIC28.43■■■□□ 2.14
CDCA5Q96FF9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CDCA5Q96FF9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.42■■■□□ 2.14
CDCA5Q96FF9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.42■■■□□ 2.14
CDCA5Q96FF9 ZNRF2P3-201ENST00000424200 374 ntBASIC28.42■■■□□ 2.14
CDCA5Q96FF9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
CDCA5Q96FF9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDCA5Q96FF9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.42■■■□□ 2.14
CDCA5Q96FF9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDCA5Q96FF9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.42■■■□□ 2.14
CDCA5Q96FF9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDCA5Q96FF9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.41■■■□□ 2.14
CDCA5Q96FF9 RARRES2P6-201ENST00000567333 442 ntBASIC28.41■■■□□ 2.14
CDCA5Q96FF9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.4■■■□□ 2.14
CDCA5Q96FF9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.39■■■□□ 2.14
CDCA5Q96FF9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CDCA5Q96FF9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CDCA5Q96FF9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDCA5Q96FF9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.38■■■□□ 2.13
CDCA5Q96FF9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.38■■■□□ 2.13
CDCA5Q96FF9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CDCA5Q96FF9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.37■■■□□ 2.13
CDCA5Q96FF9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.37■■■□□ 2.13
CDCA5Q96FF9 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.37■■■□□ 2.13
CDCA5Q96FF9 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.37■■■□□ 2.13
CDCA5Q96FF9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CDCA5Q96FF9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDCA5Q96FF9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CDCA5Q96FF9 BX255925.1-201ENST00000566954 1854 ntBASIC28.36■■■□□ 2.13
CDCA5Q96FF9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDCA5Q96FF9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.36■■■□□ 2.13
CDCA5Q96FF9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.36■■■□□ 2.13
CDCA5Q96FF9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDCA5Q96FF9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.36■■■□□ 2.13
CDCA5Q96FF9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDCA5Q96FF9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDCA5Q96FF9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.35■■■□□ 2.13
CDCA5Q96FF9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CDCA5Q96FF9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
CDCA5Q96FF9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDCA5Q96FF9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms