Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.43■□□□□ 0.86
SMIM4Q8WVI0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM4Q8WVI0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM4Q8WVI0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM4Q8WVI0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SMIM4Q8WVI0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM4Q8WVI0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SMIM4Q8WVI0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM4Q8WVI0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM4Q8WVI0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SMIM4Q8WVI0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM4Q8WVI0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM4Q8WVI0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM4Q8WVI0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM4Q8WVI0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM4Q8WVI0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM4Q8WVI0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM4Q8WVI0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM4Q8WVI0 SLC6A10P-202ENST00000431994 2058 ntBASIC20.38■□□□□ 0.85
SMIM4Q8WVI0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM4Q8WVI0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM4Q8WVI0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM4Q8WVI0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 AC097358.2-201ENST00000607541 1159 ntBASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM4Q8WVI0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM4Q8WVI0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM4Q8WVI0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM4Q8WVI0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM4Q8WVI0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SMIM4Q8WVI0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM4Q8WVI0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.35■□□□□ 0.85
SMIM4Q8WVI0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM4Q8WVI0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SMIM4Q8WVI0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.35■□□□□ 0.85
SMIM4Q8WVI0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM4Q8WVI0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.85
SMIM4Q8WVI0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SMIM4Q8WVI0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM4Q8WVI0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM4Q8WVI0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM4Q8WVI0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.33■□□□□ 0.85
SMIM4Q8WVI0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.33■□□□□ 0.85
SMIM4Q8WVI0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM4Q8WVI0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.33■□□□□ 0.84
SMIM4Q8WVI0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SMIM4Q8WVI0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM4Q8WVI0 AC004812.2-201ENST00000611079 2094 ntBASIC20.31■□□□□ 0.84
SMIM4Q8WVI0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM4Q8WVI0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMIM4Q8WVI0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM4Q8WVI0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.3■□□□□ 0.84
SMIM4Q8WVI0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM4Q8WVI0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms