Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD2Q8WV60 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD2Q8WV60 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.17■■□□□ 1.46
PTCD2Q8WV60 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
PTCD2Q8WV60 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PTCD2Q8WV60 ATP5G2P3-201ENST00000429083 425 ntBASIC24.15■■□□□ 1.46
PTCD2Q8WV60 SPCS2P3-201ENST00000500401 656 ntBASIC24.15■■□□□ 1.46
PTCD2Q8WV60 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PTCD2Q8WV60 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD2Q8WV60 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.15■■□□□ 1.46
PTCD2Q8WV60 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.15■■□□□ 1.46
PTCD2Q8WV60 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD2Q8WV60 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
PTCD2Q8WV60 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
PTCD2Q8WV60 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD2Q8WV60 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD2Q8WV60 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD2Q8WV60 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD2Q8WV60 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.14■■□□□ 1.45
PTCD2Q8WV60 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD2Q8WV60 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.12■■□□□ 1.45
PTCD2Q8WV60 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
PTCD2Q8WV60 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.11■■□□□ 1.45
PTCD2Q8WV60 DUX4L18-201ENST00000553347 1267 ntBASIC24.11■■□□□ 1.45
PTCD2Q8WV60 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.11■■□□□ 1.45
PTCD2Q8WV60 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PTCD2Q8WV60 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PTCD2Q8WV60 AC097639.1-201ENST00000565519 1891 ntBASIC24.11■■□□□ 1.45
PTCD2Q8WV60 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PTCD2Q8WV60 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PTCD2Q8WV60 TSPY13P-201ENST00000338964 914 ntBASIC24.1■■□□□ 1.45
PTCD2Q8WV60 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.1■■□□□ 1.45
PTCD2Q8WV60 AC142381.3-201ENST00000568208 1670 ntBASIC24.09■■□□□ 1.45
PTCD2Q8WV60 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PTCD2Q8WV60 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PTCD2Q8WV60 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.09■■□□□ 1.45
PTCD2Q8WV60 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.09■■□□□ 1.45
PTCD2Q8WV60 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PTCD2Q8WV60 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PTCD2Q8WV60 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.08■■□□□ 1.45
PTCD2Q8WV60 DUX4L9-201ENST00000449051 1259 ntBASIC24.08■■□□□ 1.45
PTCD2Q8WV60 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.08■■□□□ 1.45
PTCD2Q8WV60 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.44
PTCD2Q8WV60 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTCD2Q8WV60 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.07■■□□□ 1.44
PTCD2Q8WV60 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PTCD2Q8WV60 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PTCD2Q8WV60 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTCD2Q8WV60 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTCD2Q8WV60 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTCD2Q8WV60 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PTCD2Q8WV60 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PTCD2Q8WV60 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PTCD2Q8WV60 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PTCD2Q8WV60 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PTCD2Q8WV60 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PTCD2Q8WV60 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTCD2Q8WV60 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTCD2Q8WV60 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.05■■□□□ 1.44
PTCD2Q8WV60 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PTCD2Q8WV60 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTCD2Q8WV60 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTCD2Q8WV60 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.04■■□□□ 1.44
PTCD2Q8WV60 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTCD2Q8WV60 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTCD2Q8WV60 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PTCD2Q8WV60 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.04■■□□□ 1.44
PTCD2Q8WV60 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 AC022211.4-201ENST00000625094 2161 ntBASIC24.03■■□□□ 1.44
PTCD2Q8WV60 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PTCD2Q8WV60 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms