Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCHCR1Q8TD31 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCHCR1Q8TD31 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCHCR1Q8TD31 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCHCR1Q8TD31 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCHCR1Q8TD31 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CCHCR1Q8TD31 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.76■■□□□ 1.55
CCHCR1Q8TD31 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCHCR1Q8TD31 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCHCR1Q8TD31 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCHCR1Q8TD31 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCHCR1Q8TD31 AC138932.3-201ENST00000567634 1902 ntBASIC24.75■■□□□ 1.55
CCHCR1Q8TD31 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCHCR1Q8TD31 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCHCR1Q8TD31 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCHCR1Q8TD31 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCHCR1Q8TD31 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CCHCR1Q8TD31 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCHCR1Q8TD31 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCHCR1Q8TD31 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCHCR1Q8TD31 HSD17B1P1-201ENST00000590052 955 ntBASIC24.73■■□□□ 1.55
CCHCR1Q8TD31 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCHCR1Q8TD31 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.73■■□□□ 1.55
CCHCR1Q8TD31 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.73■■□□□ 1.55
CCHCR1Q8TD31 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCHCR1Q8TD31 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCHCR1Q8TD31 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCHCR1Q8TD31 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCHCR1Q8TD31 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
CCHCR1Q8TD31 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCHCR1Q8TD31 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCHCR1Q8TD31 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCHCR1Q8TD31 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.71■■□□□ 1.55
CCHCR1Q8TD31 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CCHCR1Q8TD31 AL139125.2-201ENST00000623134 1869 ntBASIC24.7■■□□□ 1.55
CCHCR1Q8TD31 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CCHCR1Q8TD31 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCHCR1Q8TD31 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCHCR1Q8TD31 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CCHCR1Q8TD31 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCHCR1Q8TD31 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.7■■□□□ 1.54
CCHCR1Q8TD31 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCHCR1Q8TD31 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.7■■□□□ 1.54
CCHCR1Q8TD31 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCHCR1Q8TD31 AC092296.2-201ENST00000589470 999 ntBASIC24.69■■□□□ 1.54
CCHCR1Q8TD31 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCHCR1Q8TD31 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCHCR1Q8TD31 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCHCR1Q8TD31 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CCHCR1Q8TD31 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCHCR1Q8TD31 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.67■■□□□ 1.54
CCHCR1Q8TD31 RNF126P1-201ENST00000567452 1320 ntBASIC24.67■■□□□ 1.54
CCHCR1Q8TD31 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.67■■□□□ 1.54
CCHCR1Q8TD31 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCHCR1Q8TD31 ECEL1P2-201ENST00000461596 1295 ntBASIC24.67■■□□□ 1.54
CCHCR1Q8TD31 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCHCR1Q8TD31 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CCHCR1Q8TD31 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.66■■□□□ 1.54
CCHCR1Q8TD31 AL157400.5-201ENST00000507624 621 ntBASIC24.66■■□□□ 1.54
CCHCR1Q8TD31 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.66■■□□□ 1.54
CCHCR1Q8TD31 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCHCR1Q8TD31 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.66■■□□□ 1.54
CCHCR1Q8TD31 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.66■■□□□ 1.54
CCHCR1Q8TD31 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCHCR1Q8TD31 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCHCR1Q8TD31 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCHCR1Q8TD31 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.65■■□□□ 1.54
CCHCR1Q8TD31 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCHCR1Q8TD31 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCHCR1Q8TD31 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCHCR1Q8TD31 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCHCR1Q8TD31 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCHCR1Q8TD31 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCHCR1Q8TD31 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCHCR1Q8TD31 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
CCHCR1Q8TD31 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCHCR1Q8TD31 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.64■■□□□ 1.53
CCHCR1Q8TD31 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.63■■□□□ 1.53
CCHCR1Q8TD31 AC097639.1-201ENST00000565519 1891 ntBASIC24.63■■□□□ 1.53
CCHCR1Q8TD31 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.63■■□□□ 1.53
CCHCR1Q8TD31 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCHCR1Q8TD31 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CCHCR1Q8TD31 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
CCHCR1Q8TD31 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCHCR1Q8TD31 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.62■■□□□ 1.53
CCHCR1Q8TD31 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.62■■□□□ 1.53
CCHCR1Q8TD31 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCHCR1Q8TD31 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.62■■□□□ 1.53
CCHCR1Q8TD31 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms