Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.85■□□□□ 0.93
CPEB3Q8NE35 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPEB3Q8NE35 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CPEB3Q8NE35 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CPEB3Q8NE35 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPEB3Q8NE35 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPEB3Q8NE35 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPEB3Q8NE35 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPEB3Q8NE35 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.83■□□□□ 0.93
CPEB3Q8NE35 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPEB3Q8NE35 AC129492.7-201ENST00000622992 756 ntBASIC20.83■□□□□ 0.93
CPEB3Q8NE35 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPEB3Q8NE35 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CPEB3Q8NE35 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 DUX4L9-201ENST00000449051 1259 ntBASIC20.82■□□□□ 0.92
CPEB3Q8NE35 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.82■□□□□ 0.92
CPEB3Q8NE35 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPEB3Q8NE35 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPEB3Q8NE35 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 AC097639.1-201ENST00000565519 1891 ntBASIC20.8■□□□□ 0.92
CPEB3Q8NE35 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 AC018755.3-202ENST00000596210 929 ntBASIC20.8■□□□□ 0.92
CPEB3Q8NE35 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPEB3Q8NE35 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CPEB3Q8NE35 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPEB3Q8NE35 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CPEB3Q8NE35 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPEB3Q8NE35 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPEB3Q8NE35 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPEB3Q8NE35 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPEB3Q8NE35 AC020928.2-201ENST00000588717 2197 ntBASIC20.78■□□□□ 0.92
CPEB3Q8NE35 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.78■□□□□ 0.92
CPEB3Q8NE35 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPEB3Q8NE35 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPEB3Q8NE35 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.77■□□□□ 0.92
CPEB3Q8NE35 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPEB3Q8NE35 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPEB3Q8NE35 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPEB3Q8NE35 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPEB3Q8NE35 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPEB3Q8NE35 MIR6765-201ENST00000614092 87 ntBASIC20.77■□□□□ 0.92
CPEB3Q8NE35 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPEB3Q8NE35 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPEB3Q8NE35 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPEB3Q8NE35 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPEB3Q8NE35 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPEB3Q8NE35 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.76■□□□□ 0.91
CPEB3Q8NE35 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CPEB3Q8NE35 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
CPEB3Q8NE35 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 KRT18P10-201ENST00000388836 1287 ntBASIC20.75■□□□□ 0.91
CPEB3Q8NE35 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPEB3Q8NE35 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 AC135731.1-201ENST00000569415 2548 ntBASIC20.74■□□□□ 0.91
CPEB3Q8NE35 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPEB3Q8NE35 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms