Protein–RNA interactions for Protein: Q8N6V4

C10orf53, UPF0728 protein C10orf53, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C10orf53Q8N6V4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C10orf53Q8N6V4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C10orf53Q8N6V4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
C10orf53Q8N6V4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
C10orf53Q8N6V4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
C10orf53Q8N6V4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
C10orf53Q8N6V4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C10orf53Q8N6V4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C10orf53Q8N6V4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
C10orf53Q8N6V4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C10orf53Q8N6V4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C10orf53Q8N6V4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C10orf53Q8N6V4 AC135731.1-201ENST00000569415 2548 ntBASIC21.7■■□□□ 1.06
C10orf53Q8N6V4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C10orf53Q8N6V4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
C10orf53Q8N6V4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C10orf53Q8N6V4 RP9P-202ENST00000450133 1212 ntBASIC21.69■■□□□ 1.06
C10orf53Q8N6V4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
C10orf53Q8N6V4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C10orf53Q8N6V4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
C10orf53Q8N6V4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.69■■□□□ 1.06
C10orf53Q8N6V4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C10orf53Q8N6V4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
C10orf53Q8N6V4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.67■■□□□ 1.06
C10orf53Q8N6V4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C10orf53Q8N6V4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
C10orf53Q8N6V4 AC093536.1-201ENST00000569153 554 ntBASIC21.67■■□□□ 1.06
C10orf53Q8N6V4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C10orf53Q8N6V4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.67■■□□□ 1.06
C10orf53Q8N6V4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.66■■□□□ 1.06
C10orf53Q8N6V4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
C10orf53Q8N6V4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
C10orf53Q8N6V4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
C10orf53Q8N6V4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C10orf53Q8N6V4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C10orf53Q8N6V4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 AC007029.1-201ENST00000604183 313 ntBASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
C10orf53Q8N6V4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 AC097639.1-201ENST00000565519 1891 ntBASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
C10orf53Q8N6V4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
C10orf53Q8N6V4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms