Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.4■■□□□ 1.82
NME8Q8N427 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NME8Q8N427 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
NME8Q8N427 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NME8Q8N427 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
NME8Q8N427 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
NME8Q8N427 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NME8Q8N427 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NME8Q8N427 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NME8Q8N427 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NME8Q8N427 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.38■■□□□ 1.81
NME8Q8N427 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.38■■□□□ 1.81
NME8Q8N427 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.37■■□□□ 1.81
NME8Q8N427 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NME8Q8N427 THA1P-201ENST00000590384 1145 ntBASIC26.37■■□□□ 1.81
NME8Q8N427 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.36■■□□□ 1.81
NME8Q8N427 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.36■■□□□ 1.81
NME8Q8N427 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
NME8Q8N427 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NME8Q8N427 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
NME8Q8N427 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NME8Q8N427 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
NME8Q8N427 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
NME8Q8N427 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NME8Q8N427 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NME8Q8N427 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.35■■□□□ 1.81
NME8Q8N427 AL592295.1-201ENST00000400984 884 ntBASIC26.35■■□□□ 1.81
NME8Q8N427 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NME8Q8N427 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NME8Q8N427 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
NME8Q8N427 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.34■■□□□ 1.81
NME8Q8N427 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.34■■□□□ 1.81
NME8Q8N427 BX664725.1-201ENST00000438252 379 ntBASIC26.34■■□□□ 1.81
NME8Q8N427 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.34■■□□□ 1.81
NME8Q8N427 KRT125P-201ENST00000546827 989 ntBASIC26.34■■□□□ 1.81
NME8Q8N427 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.34■■□□□ 1.81
NME8Q8N427 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.33■■□□□ 1.81
NME8Q8N427 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NME8Q8N427 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
NME8Q8N427 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NME8Q8N427 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.33■■□□□ 1.81
NME8Q8N427 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.33■■□□□ 1.81
NME8Q8N427 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.32■■□□□ 1.8
NME8Q8N427 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NME8Q8N427 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NME8Q8N427 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NME8Q8N427 AL356441.2-201ENST00000443009 864 ntBASIC26.32■■□□□ 1.8
NME8Q8N427 AC120024.1-201ENST00000562672 995 ntBASIC26.32■■□□□ 1.8
NME8Q8N427 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NME8Q8N427 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.32■■□□□ 1.8
NME8Q8N427 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NME8Q8N427 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NME8Q8N427 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.31■■□□□ 1.8
NME8Q8N427 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NME8Q8N427 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NME8Q8N427 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NME8Q8N427 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.31■■□□□ 1.8
NME8Q8N427 AC137630.3-201ENST00000607245 391 ntBASIC26.31■■□□□ 1.8
NME8Q8N427 AC131212.1-201ENST00000613771 668 ntBASIC26.31■■□□□ 1.8
NME8Q8N427 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NME8Q8N427 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.31■■□□□ 1.8
NME8Q8N427 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NME8Q8N427 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NME8Q8N427 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
NME8Q8N427 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
NME8Q8N427 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
NME8Q8N427 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
NME8Q8N427 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NME8Q8N427 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
NME8Q8N427 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NME8Q8N427 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
NME8Q8N427 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.29■■□□□ 1.8
NME8Q8N427 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NME8Q8N427 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
NME8Q8N427 MIR4787-201ENST00000607364 84 ntBASIC26.29■■□□□ 1.8
NME8Q8N427 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.29■■□□□ 1.8
NME8Q8N427 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.29■■□□□ 1.8
NME8Q8N427 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NME8Q8N427 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NME8Q8N427 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NME8Q8N427 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.28■■□□□ 1.8
NME8Q8N427 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
NME8Q8N427 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NME8Q8N427 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NME8Q8N427 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NME8Q8N427 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.27■■□□□ 1.8
NME8Q8N427 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NME8Q8N427 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NME8Q8N427 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.27■■□□□ 1.8
NME8Q8N427 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.26■■□□□ 1.79
NME8Q8N427 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
NME8Q8N427 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NME8Q8N427 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.25■■□□□ 1.79
NME8Q8N427 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NME8Q8N427 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NME8Q8N427 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.25■■□□□ 1.79
NME8Q8N427 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.25■■□□□ 1.79
NME8Q8N427 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NME8Q8N427 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NME8Q8N427 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms