Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DHX40Q8IX18 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DHX40Q8IX18 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.62■■□□□ 1.85
DHX40Q8IX18 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DHX40Q8IX18 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.62■■□□□ 1.85
DHX40Q8IX18 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
DHX40Q8IX18 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
DHX40Q8IX18 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.61■■□□□ 1.85
DHX40Q8IX18 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
DHX40Q8IX18 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DHX40Q8IX18 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
DHX40Q8IX18 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DHX40Q8IX18 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DHX40Q8IX18 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.6■■□□□ 1.85
DHX40Q8IX18 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DHX40Q8IX18 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
DHX40Q8IX18 AC097639.1-201ENST00000565519 1891 ntBASIC26.59■■□□□ 1.85
DHX40Q8IX18 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.59■■□□□ 1.85
DHX40Q8IX18 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.59■■□□□ 1.85
DHX40Q8IX18 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
DHX40Q8IX18 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
DHX40Q8IX18 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DHX40Q8IX18 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
DHX40Q8IX18 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.59■■□□□ 1.85
DHX40Q8IX18 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DHX40Q8IX18 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DHX40Q8IX18 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DHX40Q8IX18 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DHX40Q8IX18 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DHX40Q8IX18 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DHX40Q8IX18 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.58■■□□□ 1.85
DHX40Q8IX18 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DHX40Q8IX18 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
DHX40Q8IX18 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
DHX40Q8IX18 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DHX40Q8IX18 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DHX40Q8IX18 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
DHX40Q8IX18 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.56■■□□□ 1.84
DHX40Q8IX18 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DHX40Q8IX18 DUX4L11-201ENST00000611504 1267 ntBASIC26.56■■□□□ 1.84
DHX40Q8IX18 DUX4L12-201ENST00000614593 1267 ntBASIC26.56■■□□□ 1.84
DHX40Q8IX18 DUX4L14-201ENST00000621227 1267 ntBASIC26.56■■□□□ 1.84
DHX40Q8IX18 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.56■■□□□ 1.84
DHX40Q8IX18 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DHX40Q8IX18 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DHX40Q8IX18 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DHX40Q8IX18 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.55■■□□□ 1.84
DHX40Q8IX18 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DHX40Q8IX18 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DHX40Q8IX18 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
DHX40Q8IX18 AC133561.1-201ENST00000568600 2415 ntBASIC26.54■■□□□ 1.84
DHX40Q8IX18 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DHX40Q8IX18 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.54■■□□□ 1.84
DHX40Q8IX18 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
DHX40Q8IX18 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DHX40Q8IX18 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
DHX40Q8IX18 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.53■■□□□ 1.84
DHX40Q8IX18 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.53■■□□□ 1.84
DHX40Q8IX18 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.53■■□□□ 1.84
DHX40Q8IX18 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DHX40Q8IX18 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DHX40Q8IX18 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DHX40Q8IX18 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DHX40Q8IX18 LINC00543-201ENST00000567234 1845 ntBASIC26.51■■□□□ 1.83
DHX40Q8IX18 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
DHX40Q8IX18 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DHX40Q8IX18 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DHX40Q8IX18 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.51■■□□□ 1.83
DHX40Q8IX18 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.51■■□□□ 1.83
DHX40Q8IX18 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
DHX40Q8IX18 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
DHX40Q8IX18 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
DHX40Q8IX18 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
DHX40Q8IX18 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.5■■□□□ 1.83
DHX40Q8IX18 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.5■■□□□ 1.83
DHX40Q8IX18 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
DHX40Q8IX18 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.5■■□□□ 1.83
DHX40Q8IX18 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.5■■□□□ 1.83
DHX40Q8IX18 MIR3648-2-201ENST00000581792 180 ntBASIC26.5■■□□□ 1.83
DHX40Q8IX18 MIR3648-1-201ENST00000615959 180 ntBASIC26.5■■□□□ 1.83
DHX40Q8IX18 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
DHX40Q8IX18 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DHX40Q8IX18 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
DHX40Q8IX18 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DHX40Q8IX18 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.49■■□□□ 1.83
DHX40Q8IX18 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DHX40Q8IX18 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DHX40Q8IX18 AC016575.1-201ENST00000607026 382 ntBASIC26.49■■□□□ 1.83
DHX40Q8IX18 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DHX40Q8IX18 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DHX40Q8IX18 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DHX40Q8IX18 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.48■■□□□ 1.83
DHX40Q8IX18 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.48■■□□□ 1.83
DHX40Q8IX18 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DHX40Q8IX18 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DHX40Q8IX18 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
DHX40Q8IX18 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DHX40Q8IX18 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.47■■□□□ 1.83
DHX40Q8IX18 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DHX40Q8IX18 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms