Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00346Q8IVM7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00346Q8IVM7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LINC00346Q8IVM7 AC142381.3-201ENST00000568208 1670 ntBASIC21.08■□□□□ 0.96
LINC00346Q8IVM7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00346Q8IVM7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00346Q8IVM7 AC097639.1-201ENST00000565519 1891 ntBASIC21.07■□□□□ 0.96
LINC00346Q8IVM7 AC138932.3-201ENST00000567634 1902 ntBASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 GPX1-201ENST00000419349 1106 ntBASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 RP9P-202ENST00000450133 1212 ntBASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 AC093536.1-201ENST00000569153 554 ntBASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 AC007029.1-201ENST00000604183 313 ntBASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
LINC00346Q8IVM7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LINC00346Q8IVM7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 SLC6A10P-202ENST00000431994 2058 ntBASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 AC093323.1-202ENST00000635031 2045 ntBASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms