Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00346Q8IVM7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00346Q8IVM7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LINC00346Q8IVM7 AC142381.3-201ENST00000568208 1670 ntBASIC21.08■□□□□ 0.96
LINC00346Q8IVM7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00346Q8IVM7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00346Q8IVM7 AC097639.1-201ENST00000565519 1891 ntBASIC21.07■□□□□ 0.96
LINC00346Q8IVM7 AC138932.3-201ENST00000567634 1902 ntBASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 GPX1-201ENST00000419349 1106 ntBASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00346Q8IVM7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 RP9P-202ENST00000450133 1212 ntBASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00346Q8IVM7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 AC093536.1-201ENST00000569153 554 ntBASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00346Q8IVM7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00346Q8IVM7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00346Q8IVM7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00346Q8IVM7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 AC007029.1-201ENST00000604183 313 ntBASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00346Q8IVM7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
LINC00346Q8IVM7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LINC00346Q8IVM7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00346Q8IVM7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00346Q8IVM7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC00346Q8IVM7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 SLC6A10P-202ENST00000431994 2058 ntBASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 AC093323.1-202ENST00000635031 2045 ntBASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00346Q8IVM7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00346Q8IVM7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms