Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LRRC28Q86X40 HSD17B1P1-201ENST00000590052 955 ntBASIC21.1■□□□□ 0.97
LRRC28Q86X40 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 WHAMMP3-201ENST00000611636 1609 ntBASIC21.1■□□□□ 0.97
LRRC28Q86X40 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC28Q86X40 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC28Q86X40 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LRRC28Q86X40 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LRRC28Q86X40 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC28Q86X40 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC28Q86X40 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC28Q86X40 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC28Q86X40 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC28Q86X40 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC28Q86X40 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC28Q86X40 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC28Q86X40 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC28Q86X40 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC28Q86X40 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC28Q86X40 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LRRC28Q86X40 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LRRC28Q86X40 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LRRC28Q86X40 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC28Q86X40 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC28Q86X40 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC28Q86X40 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC28Q86X40 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LRRC28Q86X40 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
LRRC28Q86X40 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
LRRC28Q86X40 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
LRRC28Q86X40 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC28Q86X40 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC28Q86X40 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.06■□□□□ 0.96
LRRC28Q86X40 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC28Q86X40 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.06■□□□□ 0.96
LRRC28Q86X40 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LRRC28Q86X40 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC28Q86X40 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC28Q86X40 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC28Q86X40 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRC28Q86X40 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
LRRC28Q86X40 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LRRC28Q86X40 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LRRC28Q86X40 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC28Q86X40 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC28Q86X40 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC28Q86X40 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.04■□□□□ 0.96
LRRC28Q86X40 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC28Q86X40 GPX1-201ENST00000419349 1106 ntBASIC21.04■□□□□ 0.96
LRRC28Q86X40 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.04■□□□□ 0.96
LRRC28Q86X40 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LRRC28Q86X40 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC28Q86X40 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC28Q86X40 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.03■□□□□ 0.96
LRRC28Q86X40 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC28Q86X40 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC28Q86X40 AC022413.1-201ENST00000624602 984 ntBASIC21.02■□□□□ 0.96
LRRC28Q86X40 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC28Q86X40 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC28Q86X40 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.02■□□□□ 0.95
LRRC28Q86X40 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.02■□□□□ 0.95
LRRC28Q86X40 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC28Q86X40 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC28Q86X40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC28Q86X40 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC28Q86X40 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC28Q86X40 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC28Q86X40 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC28Q86X40 AC068473.5-201ENST00000616428 2072 ntBASIC21.01■□□□□ 0.95
LRRC28Q86X40 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC28Q86X40 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC28Q86X40 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC28Q86X40 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21■□□□□ 0.95
LRRC28Q86X40 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21■□□□□ 0.95
LRRC28Q86X40 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC28Q86X40 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC28Q86X40 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC28Q86X40 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC28Q86X40 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC28Q86X40 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC28Q86X40 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms