Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.17■■■□□ 2.58
RGPD4Q7Z3J3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.17■■■□□ 2.58
RGPD4Q7Z3J3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RGPD4Q7Z3J3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RGPD4Q7Z3J3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RGPD4Q7Z3J3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RGPD4Q7Z3J3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
RGPD4Q7Z3J3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.16■■■□□ 2.58
RGPD4Q7Z3J3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.15■■■□□ 2.58
RGPD4Q7Z3J3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.15■■■□□ 2.58
RGPD4Q7Z3J3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.15■■■□□ 2.58
RGPD4Q7Z3J3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.15■■■□□ 2.58
RGPD4Q7Z3J3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RGPD4Q7Z3J3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
RGPD4Q7Z3J3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
RGPD4Q7Z3J3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC31.13■■■□□ 2.57
RGPD4Q7Z3J3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
RGPD4Q7Z3J3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
RGPD4Q7Z3J3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
RGPD4Q7Z3J3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RGPD4Q7Z3J3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RGPD4Q7Z3J3 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.12■■■□□ 2.57
RGPD4Q7Z3J3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
RGPD4Q7Z3J3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
RGPD4Q7Z3J3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RGPD4Q7Z3J3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC31.1■■■□□ 2.57
RGPD4Q7Z3J3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
RGPD4Q7Z3J3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.1■■■□□ 2.57
RGPD4Q7Z3J3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RGPD4Q7Z3J3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RGPD4Q7Z3J3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.1■■■□□ 2.57
RGPD4Q7Z3J3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RGPD4Q7Z3J3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.09■■■□□ 2.57
RGPD4Q7Z3J3 PBX2P1-201ENST00000493219 1291 ntBASIC31.09■■■□□ 2.57
RGPD4Q7Z3J3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
RGPD4Q7Z3J3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.09■■■□□ 2.57
RGPD4Q7Z3J3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
RGPD4Q7Z3J3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
RGPD4Q7Z3J3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
RGPD4Q7Z3J3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
RGPD4Q7Z3J3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.07■■■□□ 2.56
RGPD4Q7Z3J3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.07■■■□□ 2.56
RGPD4Q7Z3J3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
RGPD4Q7Z3J3 AC105265.2-201ENST00000467189 838 ntBASIC31.06■■■□□ 2.56
RGPD4Q7Z3J3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
RGPD4Q7Z3J3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RGPD4Q7Z3J3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RGPD4Q7Z3J3 EDA-201ENST00000338901 1233 ntBASIC31.04■■■□□ 2.56
RGPD4Q7Z3J3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.04■■■□□ 2.56
RGPD4Q7Z3J3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RGPD4Q7Z3J3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RGPD4Q7Z3J3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.03■■■□□ 2.56
RGPD4Q7Z3J3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.03■■■□□ 2.56
RGPD4Q7Z3J3 MIR6821-201ENST00000617625 74 ntBASIC31.03■■■□□ 2.56
RGPD4Q7Z3J3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RGPD4Q7Z3J3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RGPD4Q7Z3J3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.02■■■□□ 2.56
RGPD4Q7Z3J3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.02■■■□□ 2.56
RGPD4Q7Z3J3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RGPD4Q7Z3J3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
RGPD4Q7Z3J3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
RGPD4Q7Z3J3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
RGPD4Q7Z3J3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
RGPD4Q7Z3J3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
RGPD4Q7Z3J3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RGPD4Q7Z3J3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
RGPD4Q7Z3J3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.99■■■□□ 2.55
RGPD4Q7Z3J3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
RGPD4Q7Z3J3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RGPD4Q7Z3J3 AC097381.1-201ENST00000429019 1296 ntBASIC30.98■■■□□ 2.55
RGPD4Q7Z3J3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.98■■■□□ 2.55
RGPD4Q7Z3J3 AL136162.1-201ENST00000607711 1078 ntBASIC30.97■■■□□ 2.55
RGPD4Q7Z3J3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
RGPD4Q7Z3J3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.97■■■□□ 2.55
RGPD4Q7Z3J3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
RGPD4Q7Z3J3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RGPD4Q7Z3J3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms