Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.27■■■□□ 2.12
CHST3Q7LGC8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CHST3Q7LGC8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
CHST3Q7LGC8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CHST3Q7LGC8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHST3Q7LGC8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHST3Q7LGC8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
CHST3Q7LGC8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHST3Q7LGC8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHST3Q7LGC8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHST3Q7LGC8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHST3Q7LGC8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHST3Q7LGC8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.25■■■□□ 2.11
CHST3Q7LGC8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHST3Q7LGC8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHST3Q7LGC8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHST3Q7LGC8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHST3Q7LGC8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
CHST3Q7LGC8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CHST3Q7LGC8 AC020928.2-201ENST00000588717 2197 ntBASIC28.24■■■□□ 2.11
CHST3Q7LGC8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHST3Q7LGC8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHST3Q7LGC8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.23■■■□□ 2.11
CHST3Q7LGC8 DUX4L18-201ENST00000553347 1267 ntBASIC28.23■■■□□ 2.11
CHST3Q7LGC8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.23■■■□□ 2.11
CHST3Q7LGC8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHST3Q7LGC8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHST3Q7LGC8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CHST3Q7LGC8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHST3Q7LGC8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHST3Q7LGC8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CHST3Q7LGC8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
CHST3Q7LGC8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CHST3Q7LGC8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CHST3Q7LGC8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHST3Q7LGC8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHST3Q7LGC8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CHST3Q7LGC8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CHST3Q7LGC8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CHST3Q7LGC8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
CHST3Q7LGC8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CHST3Q7LGC8 AC004987.1-201ENST00000428627 508 ntBASIC28.19■■■□□ 2.1
CHST3Q7LGC8 AC018755.3-202ENST00000596210 929 ntBASIC28.19■■■□□ 2.1
CHST3Q7LGC8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHST3Q7LGC8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHST3Q7LGC8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHST3Q7LGC8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CHST3Q7LGC8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.18■■■□□ 2.1
CHST3Q7LGC8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CHST3Q7LGC8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CHST3Q7LGC8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.18■■■□□ 2.1
CHST3Q7LGC8 AC097639.1-201ENST00000565519 1891 ntBASIC28.18■■■□□ 2.1
CHST3Q7LGC8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CHST3Q7LGC8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHST3Q7LGC8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHST3Q7LGC8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHST3Q7LGC8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
CHST3Q7LGC8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.17■■■□□ 2.1
CHST3Q7LGC8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHST3Q7LGC8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.16■■■□□ 2.1
CHST3Q7LGC8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHST3Q7LGC8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CHST3Q7LGC8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.16■■■□□ 2.1
CHST3Q7LGC8 MIR6765-201ENST00000614092 87 ntBASIC28.16■■■□□ 2.1
CHST3Q7LGC8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
CHST3Q7LGC8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.16■■■□□ 2.1
CHST3Q7LGC8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.15■■■□□ 2.1
CHST3Q7LGC8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHST3Q7LGC8 ATP5G2P3-201ENST00000429083 425 ntBASIC28.14■■■□□ 2.1
CHST3Q7LGC8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.14■■■□□ 2.1
CHST3Q7LGC8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHST3Q7LGC8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.14■■■□□ 2.1
CHST3Q7LGC8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.14■■■□□ 2.09
CHST3Q7LGC8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.13■■■□□ 2.09
CHST3Q7LGC8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHST3Q7LGC8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHST3Q7LGC8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
CHST3Q7LGC8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHST3Q7LGC8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHST3Q7LGC8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
CHST3Q7LGC8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHST3Q7LGC8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHST3Q7LGC8 TSPY13P-201ENST00000338964 914 ntBASIC28.11■■■□□ 2.09
CHST3Q7LGC8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CHST3Q7LGC8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHST3Q7LGC8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CHST3Q7LGC8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
CHST3Q7LGC8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHST3Q7LGC8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.1■■■□□ 2.09
CHST3Q7LGC8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.1■■■□□ 2.09
CHST3Q7LGC8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms