Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.23■■□□□ 1.63
SYCE2Q6PIF2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
SYCE2Q6PIF2 AL117332.1-201ENST00000622628 974 ntBASIC25.23■■□□□ 1.63
SYCE2Q6PIF2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.23■■□□□ 1.63
SYCE2Q6PIF2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 MIR4281-201ENST00000580852 62 ntBASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 AC110285.6-201ENST00000617652 491 ntBASIC25.22■■□□□ 1.63
SYCE2Q6PIF2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SYCE2Q6PIF2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
SYCE2Q6PIF2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
SYCE2Q6PIF2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.21■■□□□ 1.63
SYCE2Q6PIF2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 MIR3621-201ENST00000580529 85 ntBASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.2■■□□□ 1.62
SYCE2Q6PIF2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SYCE2Q6PIF2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SYCE2Q6PIF2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.19■■□□□ 1.62
SYCE2Q6PIF2 AC010997.5-201ENST00000609182 354 ntBASIC25.19■■□□□ 1.62
SYCE2Q6PIF2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.19■■□□□ 1.62
SYCE2Q6PIF2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SYCE2Q6PIF2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.19■■□□□ 1.62
SYCE2Q6PIF2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.18■■□□□ 1.62
SYCE2Q6PIF2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYCE2Q6PIF2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SYCE2Q6PIF2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SYCE2Q6PIF2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 BX255925.1-201ENST00000566954 1854 ntBASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.17■■□□□ 1.62
SYCE2Q6PIF2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SYCE2Q6PIF2 AC005837.3-201ENST00000612163 286 ntBASIC25.16■■□□□ 1.62
SYCE2Q6PIF2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 MIR6724-1-201ENST00000616420 92 ntBASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 MIR6724-2-201ENST00000616483 92 ntBASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 MIR6724-4-201ENST00000617390 92 ntBASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 MIR6724-3-201ENST00000622482 92 ntBASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYCE2Q6PIF2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYCE2Q6PIF2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYCE2Q6PIF2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.14■■□□□ 1.62
SYCE2Q6PIF2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
SYCE2Q6PIF2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SYCE2Q6PIF2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.14■■□□□ 1.62
SYCE2Q6PIF2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.14■■□□□ 1.61
SYCE2Q6PIF2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SYCE2Q6PIF2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SYCE2Q6PIF2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SYCE2Q6PIF2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.13■■□□□ 1.61
SYCE2Q6PIF2 MIR4466-201ENST00000606121 54 ntBASIC25.13■■□□□ 1.61
SYCE2Q6PIF2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
SYCE2Q6PIF2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SYCE2Q6PIF2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 AC096631.2-201ENST00000436136 790 ntBASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYCE2Q6PIF2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SYCE2Q6PIF2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.11■■□□□ 1.61
SYCE2Q6PIF2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SYCE2Q6PIF2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SYCE2Q6PIF2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SYCE2Q6PIF2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.1■■□□□ 1.61
SYCE2Q6PIF2 MTDHP2-201ENST00000601468 714 ntBASIC25.1■■□□□ 1.61
SYCE2Q6PIF2 AL356740.2-201ENST00000601559 647 ntBASIC25.1■■□□□ 1.61
SYCE2Q6PIF2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SYCE2Q6PIF2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.09■■□□□ 1.61
SYCE2Q6PIF2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SYCE2Q6PIF2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.08■■□□□ 1.61
SYCE2Q6PIF2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SYCE2Q6PIF2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SYCE2Q6PIF2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SYCE2Q6PIF2 DRD5P2-201ENST00000421395 2012 ntBASIC25.07■■□□□ 1.6
SYCE2Q6PIF2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SYCE2Q6PIF2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.07■■□□□ 1.6
SYCE2Q6PIF2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms