Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf88Q6PI97 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.53■□□□□ 0.88
C11orf88Q6PI97 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf88Q6PI97 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf88Q6PI97 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf88Q6PI97 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
C11orf88Q6PI97 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf88Q6PI97 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
C11orf88Q6PI97 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
C11orf88Q6PI97 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.52■□□□□ 0.87
C11orf88Q6PI97 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
C11orf88Q6PI97 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
C11orf88Q6PI97 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 AC135983.2-203ENST00000454486 1613 ntBASIC20.51■□□□□ 0.87
C11orf88Q6PI97 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf88Q6PI97 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C11orf88Q6PI97 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.5■□□□□ 0.87
C11orf88Q6PI97 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
C11orf88Q6PI97 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
C11orf88Q6PI97 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
C11orf88Q6PI97 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
C11orf88Q6PI97 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.49■□□□□ 0.87
C11orf88Q6PI97 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C11orf88Q6PI97 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.49■□□□□ 0.87
C11orf88Q6PI97 AC012676.1-201ENST00000574705 1949 ntBASIC20.49■□□□□ 0.87
C11orf88Q6PI97 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C11orf88Q6PI97 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
C11orf88Q6PI97 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
C11orf88Q6PI97 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.49■□□□□ 0.87
C11orf88Q6PI97 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.48■□□□□ 0.87
C11orf88Q6PI97 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf88Q6PI97 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.47■□□□□ 0.87
C11orf88Q6PI97 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.47■□□□□ 0.87
C11orf88Q6PI97 HSD17B1P1-201ENST00000590052 955 ntBASIC20.47■□□□□ 0.87
C11orf88Q6PI97 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.47■□□□□ 0.87
C11orf88Q6PI97 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf88Q6PI97 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf88Q6PI97 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf88Q6PI97 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C11orf88Q6PI97 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
C11orf88Q6PI97 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
C11orf88Q6PI97 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C11orf88Q6PI97 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C11orf88Q6PI97 WHAMMP2-203ENST00000563942 1603 ntBASIC20.45■□□□□ 0.87
C11orf88Q6PI97 AL139125.2-201ENST00000623134 1869 ntBASIC20.45■□□□□ 0.86
C11orf88Q6PI97 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf88Q6PI97 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C11orf88Q6PI97 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C11orf88Q6PI97 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.44■□□□□ 0.86
C11orf88Q6PI97 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.43■□□□□ 0.86
C11orf88Q6PI97 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.42■□□□□ 0.86
C11orf88Q6PI97 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms