Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CERKLQ49MI3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CERKLQ49MI3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.2■■■□□ 2.1
CERKLQ49MI3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.2■■■□□ 2.1
CERKLQ49MI3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.2■■■□□ 2.1
CERKLQ49MI3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CERKLQ49MI3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CERKLQ49MI3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CERKLQ49MI3 KRT18P24-201ENST00000344739 1156 ntBASIC28.19■■■□□ 2.1
CERKLQ49MI3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
CERKLQ49MI3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.19■■■□□ 2.1
CERKLQ49MI3 Z92544.1-202ENST00000571933 1220 ntBASIC28.19■■■□□ 2.1
CERKLQ49MI3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CERKLQ49MI3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CERKLQ49MI3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CERKLQ49MI3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CERKLQ49MI3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CERKLQ49MI3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CERKLQ49MI3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.18■■■□□ 2.1
CERKLQ49MI3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.17■■■□□ 2.1
CERKLQ49MI3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.17■■■□□ 2.1
CERKLQ49MI3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
CERKLQ49MI3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CERKLQ49MI3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.17■■■□□ 2.1
CERKLQ49MI3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CERKLQ49MI3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CERKLQ49MI3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CERKLQ49MI3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CERKLQ49MI3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.16■■■□□ 2.1
CERKLQ49MI3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CERKLQ49MI3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.15■■■□□ 2.1
CERKLQ49MI3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.15■■■□□ 2.1
CERKLQ49MI3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CERKLQ49MI3 THA1P-201ENST00000590384 1145 ntBASIC28.15■■■□□ 2.1
CERKLQ49MI3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CERKLQ49MI3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.14■■■□□ 2.1
CERKLQ49MI3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CERKLQ49MI3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
CERKLQ49MI3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.14■■■□□ 2.1
CERKLQ49MI3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.14■■■□□ 2.1
CERKLQ49MI3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CERKLQ49MI3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CERKLQ49MI3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CERKLQ49MI3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CERKLQ49MI3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CERKLQ49MI3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.13■■■□□ 2.09
CERKLQ49MI3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
CERKLQ49MI3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CERKLQ49MI3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.13■■■□□ 2.09
CERKLQ49MI3 AC120024.1-201ENST00000562672 995 ntBASIC28.12■■■□□ 2.09
CERKLQ49MI3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CERKLQ49MI3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CERKLQ49MI3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CERKLQ49MI3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CERKLQ49MI3 AL592295.1-201ENST00000400984 884 ntBASIC28.11■■■□□ 2.09
CERKLQ49MI3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
CERKLQ49MI3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.11■■■□□ 2.09
CERKLQ49MI3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.11■■■□□ 2.09
CERKLQ49MI3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.11■■■□□ 2.09
CERKLQ49MI3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CERKLQ49MI3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
CERKLQ49MI3 AC131212.1-201ENST00000613771 668 ntBASIC28.1■■■□□ 2.09
CERKLQ49MI3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.09■■■□□ 2.09
CERKLQ49MI3 BX664725.1-201ENST00000438252 379 ntBASIC28.09■■■□□ 2.09
CERKLQ49MI3 AL356441.2-201ENST00000443009 864 ntBASIC28.09■■■□□ 2.09
CERKLQ49MI3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CERKLQ49MI3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.08■■■□□ 2.09
CERKLQ49MI3 KRT125P-201ENST00000546827 989 ntBASIC28.08■■■□□ 2.09
CERKLQ49MI3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CERKLQ49MI3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CERKLQ49MI3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
CERKLQ49MI3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.08■■■□□ 2.09
CERKLQ49MI3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
CERKLQ49MI3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CERKLQ49MI3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CERKLQ49MI3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CERKLQ49MI3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.07■■■□□ 2.08
CERKLQ49MI3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CERKLQ49MI3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
CERKLQ49MI3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.07■■■□□ 2.08
CERKLQ49MI3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CERKLQ49MI3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CERKLQ49MI3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CERKLQ49MI3 MIR4787-201ENST00000607364 84 ntBASIC28.06■■■□□ 2.08
CERKLQ49MI3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CERKLQ49MI3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
CERKLQ49MI3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CERKLQ49MI3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CERKLQ49MI3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CERKLQ49MI3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CERKLQ49MI3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CERKLQ49MI3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CERKLQ49MI3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
CERKLQ49MI3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
CERKLQ49MI3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CERKLQ49MI3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.04■■■□□ 2.08
CERKLQ49MI3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CERKLQ49MI3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CERKLQ49MI3 AC137630.3-201ENST00000607245 391 ntBASIC28.04■■■□□ 2.08
CERKLQ49MI3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms