Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE4Q2TBC4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE4Q2TBC4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE4Q2TBC4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.32■■□□□ 1.16
PRICKLE4Q2TBC4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE4Q2TBC4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE4Q2TBC4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE4Q2TBC4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE4Q2TBC4 KRT18P10-201ENST00000388836 1287 ntBASIC22.31■■□□□ 1.16
PRICKLE4Q2TBC4 AC018755.3-202ENST00000596210 929 ntBASIC22.31■■□□□ 1.16
PRICKLE4Q2TBC4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE4Q2TBC4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE4Q2TBC4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE4Q2TBC4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE4Q2TBC4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.3■■□□□ 1.16
PRICKLE4Q2TBC4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE4Q2TBC4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
PRICKLE4Q2TBC4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
PRICKLE4Q2TBC4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 AC020928.2-201ENST00000588717 2197 ntBASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE4Q2TBC4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 MIR6765-201ENST00000614092 87 ntBASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE4Q2TBC4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE4Q2TBC4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PRICKLE4Q2TBC4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE4Q2TBC4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE4Q2TBC4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PRICKLE4Q2TBC4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE4Q2TBC4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE4Q2TBC4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PRICKLE4Q2TBC4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PRICKLE4Q2TBC4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PRICKLE4Q2TBC4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRICKLE4Q2TBC4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRICKLE4Q2TBC4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PRICKLE4Q2TBC4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PRICKLE4Q2TBC4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.25■■□□□ 1.15
PRICKLE4Q2TBC4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.24■■□□□ 1.15
PRICKLE4Q2TBC4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRICKLE4Q2TBC4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PRICKLE4Q2TBC4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.24■■□□□ 1.15
PRICKLE4Q2TBC4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRICKLE4Q2TBC4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRICKLE4Q2TBC4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PRICKLE4Q2TBC4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRICKLE4Q2TBC4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PRICKLE4Q2TBC4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRICKLE4Q2TBC4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRICKLE4Q2TBC4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRICKLE4Q2TBC4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.22■■□□□ 1.15
PRICKLE4Q2TBC4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRICKLE4Q2TBC4 RPS2P7-201ENST00000447334 885 ntBASIC22.22■■□□□ 1.15
PRICKLE4Q2TBC4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PRICKLE4Q2TBC4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PRICKLE4Q2TBC4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PRICKLE4Q2TBC4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PRICKLE4Q2TBC4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE4Q2TBC4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE4Q2TBC4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.2■■□□□ 1.14
PRICKLE4Q2TBC4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE4Q2TBC4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
PRICKLE4Q2TBC4 AC087393.1-201ENST00000582896 145 ntBASIC22.2■■□□□ 1.14
PRICKLE4Q2TBC4 AC004987.1-201ENST00000428627 508 ntBASIC22.19■■□□□ 1.14
PRICKLE4Q2TBC4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.19■■□□□ 1.14
PRICKLE4Q2TBC4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE4Q2TBC4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE4Q2TBC4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE4Q2TBC4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.19■■□□□ 1.14
PRICKLE4Q2TBC4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
PRICKLE4Q2TBC4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.18■■□□□ 1.14
PRICKLE4Q2TBC4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PRICKLE4Q2TBC4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms