Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 tR(ACG)EtR(ACG)E 73 nt6.03□□□□□ -1.44
RPN9Q04062 tR(ACG)KtR(ACG)K 73 nt6.03□□□□□ -1.44
RPN9Q04062 tR(ACG)LtR(ACG)L 73 nt6.03□□□□□ -1.44
RPN9Q04062 tR(ACG)OtR(ACG)O 73 nt6.03□□□□□ -1.44
RPN9Q04062 MOG1YJR074W 657 nt6.03□□□□□ -1.44
RPN9Q04062 ATG17YLR423C 1254 nt6.03□□□□□ -1.44
RPN9Q04062 YHM2YMR241W 945 nt6.03□□□□□ -1.44
RPN9Q04062 RPS28AYOR167C 204 nt6.03□□□□□ -1.44
RPN9Q04062 YPR114WYPR114W 948 nt6.03□□□□□ -1.44
RPN9Q04062 YMR027WYMR027W 1413 nt6.02□□□□□ -1.45
RPN9Q04062 KKQ8YKL168C 2175 nt6.02□□□□□ -1.45
RPN9Q04062 YEL009C-AYEL009C-A 408 nt6.02□□□□□ -1.45
RPN9Q04062 DOT5YIL010W 648 nt6.02□□□□□ -1.45
RPN9Q04062 YIR020W-AYIR020W-A 243 nt6.02□□□□□ -1.45
RPN9Q04062 ICS3YJL077C 396 nt6.02□□□□□ -1.45
RPN9Q04062 TFB4YPR056W 1017 nt6.02□□□□□ -1.45
RPN9Q04062 HST3YOR025W 1344 nt6.01□□□□□ -1.45
RPN9Q04062 PET112YBL080C 1626 nt6.01□□□□□ -1.45
RPN9Q04062 SPG1YGR236C 288 nt6.01□□□□□ -1.45
RPN9Q04062 PRE3YJL001W 648 nt6.01□□□□□ -1.45
RPN9Q04062 IVY1YDR229W 1362 nt6.01□□□□□ -1.45
RPN9Q04062 DRS1YLL008W 2259 nt6.01□□□□□ -1.45
RPN9Q04062 DEF1YKL054C 2217 nt6.01□□□□□ -1.45
RPN9Q04062 LYS21YDL131W 1323 nt6□□□□□ -1.45
RPN9Q04062 NHA1YLR138W 2958 nt6□□□□□ -1.45
RPN9Q04062 PGK1YCR012W 1251 nt6□□□□□ -1.45
RPN9Q04062 RPT3YDR394W 1287 nt6□□□□□ -1.45
RPN9Q04062 BNS1YGR230W 414 nt6□□□□□ -1.45
RPN9Q04062 BUD32YGR262C 786 nt6□□□□□ -1.45
RPN9Q04062 LEU5YHR002W 1074 nt6□□□□□ -1.45
RPN9Q04062 GCV3YAL044C 513 nt6□□□□□ -1.45
RPN9Q04062 YPR160C-AYPR160C-A 285 nt6□□□□□ -1.45
RPN9Q04062 SKS1YPL026C 1509 nt5.99□□□□□ -1.45
RPN9Q04062 CIS3YJL158C 684 nt5.99□□□□□ -1.45
RPN9Q04062 ARA2YMR041C 1008 nt5.99□□□□□ -1.45
RPN9Q04062 YNL042W-BYNL042W-B 258 nt5.99□□□□□ -1.45
RPN9Q04062 HSP150YJL159W 1242 nt5.98□□□□□ -1.45
RPN9Q04062 YML083CYML083C 1257 nt5.98□□□□□ -1.45
RPN9Q04062 MRPS12YNR036C 462 nt5.98□□□□□ -1.45
RPN9Q04062 RAD24YER173W 1980 nt5.98□□□□□ -1.45
RPN9Q04062 FRS2YFL022C 1512 nt5.98□□□□□ -1.45
RPN9Q04062 TEP1YNL128W 1305 nt5.98□□□□□ -1.45
RPN9Q04062 IMA5YJL216C 1746 nt5.97□□□□□ -1.45
RPN9Q04062 GPI11YDR302W 660 nt5.97□□□□□ -1.45
RPN9Q04062 PPM1YDR435C 987 nt5.97□□□□□ -1.45
RPN9Q04062 MRS1YIR021W 1092 nt5.97□□□□□ -1.45
RPN9Q04062 IFA38YBR159W 1044 nt5.97□□□□□ -1.45
RPN9Q04062 YOL036WYOL036W 2286 nt5.97□□□□□ -1.45
RPN9Q04062 HXT17YNR072W 1695 nt5.97□□□□□ -1.45
RPN9Q04062 XBP1YIL101C 1944 nt5.97□□□□□ -1.45
RPN9Q04062 TEL2YGR099W 2067 nt5.97□□□□□ -1.45
RPN9Q04062 MSS1YMR023C 1581 nt5.97□□□□□ -1.45
RPN9Q04062 UTP4YDR324C 2331 nt5.96□□□□□ -1.46
RPN9Q04062 YOL163WYOL163W 510 nt5.96□□□□□ -1.46
RPN9Q04062 YPR123CYPR123C 435 nt5.96□□□□□ -1.46
RPN9Q04062 YHL017WYHL017W 1599 nt5.96□□□□□ -1.46
RPN9Q04062 PRI2YKL045W 1587 nt5.96□□□□□ -1.46
RPN9Q04062 PRP24YMR268C 1335 nt5.96□□□□□ -1.46
RPN9Q04062 ATG4YNL223W 1485 nt5.96□□□□□ -1.46
RPN9Q04062 IES1YFL013C 2079 nt5.95□□□□□ -1.46
RPN9Q04062 YJL211CYJL211C 444 nt5.95□□□□□ -1.46
RPN9Q04062 HAP3YBL021C 435 nt5.95□□□□□ -1.46
RPN9Q04062 TPO3YPR156C 1869 nt5.95□□□□□ -1.46
RPN9Q04062 MNN5YJL186W 1761 nt5.95□□□□□ -1.46
RPN9Q04062 NPL6YMR091C 1308 nt5.95□□□□□ -1.46
RPN9Q04062 ADE12YNL220W 1302 nt5.95□□□□□ -1.46
RPN9Q04062 RPN11YFR004W 921 nt5.94□□□□□ -1.46
RPN9Q04062 MED6YHR058C 888 nt5.94□□□□□ -1.46
RPN9Q04062 YNR040WYNR040W 771 nt5.94□□□□□ -1.46
RPN9Q04062 PCS60YBR222C 1632 nt5.94□□□□□ -1.46
RPN9Q04062 CRZ1YNL027W 2037 nt5.94□□□□□ -1.46
RPN9Q04062 CNE1YAL058W 1509 nt5.94□□□□□ -1.46
RPN9Q04062 LCP5YER127W 1074 nt5.93□□□□□ -1.46
RPN9Q04062 SUP2tY(GUA)D 75 nt5.93□□□□□ -1.46
RPN9Q04062 SUP11tY(GUA)F1 75 nt5.93□□□□□ -1.46
RPN9Q04062 SUP6tY(GUA)F2 75 nt5.93□□□□□ -1.46
RPN9Q04062 SUP7tY(GUA)J1 75 nt5.93□□□□□ -1.46
RPN9Q04062 SUP4tY(GUA)J2 75 nt5.93□□□□□ -1.46
RPN9Q04062 SUP5tY(GUA)M1 75 nt5.93□□□□□ -1.46
RPN9Q04062 SUP8tY(GUA)M2 75 nt5.93□□□□□ -1.46
RPN9Q04062 SUP3tY(GUA)O 75 nt5.93□□□□□ -1.46
RPN9Q04062 YML6YML025C 861 nt5.93□□□□□ -1.46
RPN9Q04062 GLN1YPR035W 1113 nt5.93□□□□□ -1.46
RPN9Q04062 YBR124WYBR124W 360 nt5.93□□□□□ -1.46
RPN9Q04062 PYK2YOR347C 1521 nt5.93□□□□□ -1.46
RPN9Q04062 MRPS5YBR251W 924 nt5.92□□□□□ -1.46
RPN9Q04062 HAS1YMR290C 1518 nt5.92□□□□□ -1.46
RPN9Q04062 SCT1YBL011W 2280 nt5.92□□□□□ -1.46
RPN9Q04062 COX20YDR231C 618 nt5.91□□□□□ -1.46
RPN9Q04062 AI5_BETAQ0075 1065 nt5.91□□□□□ -1.46
RPN9Q04062 SWP1YMR149W 861 nt5.91□□□□□ -1.46
RPN9Q04062 RDL2YOR286W 450 nt5.91□□□□□ -1.46
RPN9Q04062 RPO26YPR187W 468 nt5.91□□□□□ -1.46
RPN9Q04062 SUB2YDL084W 1341 nt5.91□□□□□ -1.46
RPN9Q04062 EEB1YPL095C 1371 nt5.91□□□□□ -1.46
RPN9Q04062 VTH1YIL173W 4650 nt5.9□□□□□ -1.46
RPN9Q04062 VTH2YJL222W 4650 nt5.9□□□□□ -1.46
RPN9Q04062 SUP19tS(UGA)E 82 nt5.9□□□□□ -1.46
RPN9Q04062 SUP17tS(UGA)I 82 nt5.9□□□□□ -1.46
RPN9Q04062 SUP16tS(UGA)P 82 nt5.9□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms