Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
GABREP78334 AC092028.1-203ENST00000608262 953 ntBASIC22.89■■□□□ 1.25
GABREP78334 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GABREP78334 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
GABREP78334 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.88■■□□□ 1.25
GABREP78334 AL449106.1-201ENST00000608517 1980 ntBASIC22.88■■□□□ 1.25
GABREP78334 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GABREP78334 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.25
GABREP78334 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.88■■□□□ 1.25
GABREP78334 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
GABREP78334 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
GABREP78334 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
GABREP78334 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.87■■□□□ 1.25
GABREP78334 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
GABREP78334 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
GABREP78334 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
GABREP78334 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
GABREP78334 AL136116.3-201ENST00000402907 1138 ntBASIC22.86■■□□□ 1.25
GABREP78334 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
GABREP78334 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
GABREP78334 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.86■■□□□ 1.25
GABREP78334 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
GABREP78334 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
GABREP78334 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
GABREP78334 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
GABREP78334 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.85■■□□□ 1.25
GABREP78334 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
GABREP78334 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
GABREP78334 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
GABREP78334 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
GABREP78334 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.84■■□□□ 1.25
GABREP78334 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.83■■□□□ 1.25
GABREP78334 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.83■■□□□ 1.25
GABREP78334 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
GABREP78334 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
GABREP78334 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
GABREP78334 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
GABREP78334 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
GABREP78334 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
GABREP78334 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.82■■□□□ 1.24
GABREP78334 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.82■■□□□ 1.24
GABREP78334 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.82■■□□□ 1.24
GABREP78334 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.82■■□□□ 1.24
GABREP78334 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
GABREP78334 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
GABREP78334 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
GABREP78334 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.81■■□□□ 1.24
GABREP78334 MIR4281-201ENST00000580852 62 ntBASIC22.81■■□□□ 1.24
GABREP78334 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.81■■□□□ 1.24
GABREP78334 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.81■■□□□ 1.24
GABREP78334 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
GABREP78334 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
GABREP78334 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
GABREP78334 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
GABREP78334 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
GABREP78334 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
GABREP78334 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
GABREP78334 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
GABREP78334 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.8■■□□□ 1.24
GABREP78334 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.8■■□□□ 1.24
GABREP78334 AL117332.1-201ENST00000622628 974 ntBASIC22.8■■□□□ 1.24
GABREP78334 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.8■■□□□ 1.24
GABREP78334 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
GABREP78334 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
GABREP78334 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
GABREP78334 AC010997.5-201ENST00000609182 354 ntBASIC22.79■■□□□ 1.24
GABREP78334 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
GABREP78334 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.79■■□□□ 1.24
GABREP78334 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
GABREP78334 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.78■■□□□ 1.24
GABREP78334 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
GABREP78334 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.77■■□□□ 1.24
GABREP78334 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
GABREP78334 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.77■■□□□ 1.24
GABREP78334 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.77■■□□□ 1.24
GABREP78334 MTDHP2-201ENST00000601468 714 ntBASIC22.77■■□□□ 1.24
GABREP78334 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.77■■□□□ 1.24
GABREP78334 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
GABREP78334 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
GABREP78334 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
GABREP78334 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
GABREP78334 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
GABREP78334 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
GABREP78334 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
GABREP78334 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
GABREP78334 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
GABREP78334 MIR3621-201ENST00000580529 85 ntBASIC22.75■■□□□ 1.23
GABREP78334 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms