Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.14■■□□□ 1.29
CLDN6P56747 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.14■■□□□ 1.29
CLDN6P56747 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN6P56747 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.14■■□□□ 1.29
CLDN6P56747 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.14■■□□□ 1.29
CLDN6P56747 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN6P56747 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN6P56747 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN6P56747 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CLDN6P56747 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN6P56747 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.13■■□□□ 1.29
CLDN6P56747 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CLDN6P56747 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN6P56747 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CLDN6P56747 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN6P56747 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN6P56747 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN6P56747 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN6P56747 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN6P56747 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
CLDN6P56747 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.12■■□□□ 1.29
CLDN6P56747 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.12■■□□□ 1.29
CLDN6P56747 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.12■■□□□ 1.29
CLDN6P56747 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.12■■□□□ 1.29
CLDN6P56747 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.12■■□□□ 1.29
CLDN6P56747 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.12■■□□□ 1.29
CLDN6P56747 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CLDN6P56747 AL136116.3-201ENST00000402907 1138 ntBASIC23.11■■□□□ 1.29
CLDN6P56747 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.11■■□□□ 1.29
CLDN6P56747 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.11■■□□□ 1.29
CLDN6P56747 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.11■■□□□ 1.29
CLDN6P56747 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN6P56747 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.1■■□□□ 1.29
CLDN6P56747 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.1■■□□□ 1.29
CLDN6P56747 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CLDN6P56747 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN6P56747 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN6P56747 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CLDN6P56747 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN6P56747 AC092028.1-203ENST00000608262 953 ntBASIC23.09■■□□□ 1.29
CLDN6P56747 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN6P56747 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN6P56747 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN6P56747 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CLDN6P56747 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.08■■□□□ 1.29
CLDN6P56747 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN6P56747 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN6P56747 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLDN6P56747 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLDN6P56747 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
CLDN6P56747 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN6P56747 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN6P56747 AC110285.6-201ENST00000617652 491 ntBASIC23.07■■□□□ 1.28
CLDN6P56747 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN6P56747 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN6P56747 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN6P56747 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CLDN6P56747 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN6P56747 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CLDN6P56747 AL117332.1-201ENST00000622628 974 ntBASIC23.05■■□□□ 1.28
CLDN6P56747 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN6P56747 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN6P56747 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
CLDN6P56747 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.04■■□□□ 1.28
CLDN6P56747 MIR4281-201ENST00000580852 62 ntBASIC23.04■■□□□ 1.28
CLDN6P56747 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.04■■□□□ 1.28
CLDN6P56747 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CLDN6P56747 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.03■■□□□ 1.28
CLDN6P56747 DRD5P2-201ENST00000421395 2012 ntBASIC23.03■■□□□ 1.28
CLDN6P56747 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN6P56747 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.03■■□□□ 1.28
CLDN6P56747 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.03■■□□□ 1.28
CLDN6P56747 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.03■■□□□ 1.28
CLDN6P56747 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN6P56747 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CLDN6P56747 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN6P56747 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.02■■□□□ 1.28
CLDN6P56747 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.02■■□□□ 1.28
CLDN6P56747 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CLDN6P56747 BX255925.1-201ENST00000566954 1854 ntBASIC23.02■■□□□ 1.28
CLDN6P56747 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.01■■□□□ 1.27
CLDN6P56747 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
CLDN6P56747 AC096631.2-201ENST00000436136 790 ntBASIC23.01■■□□□ 1.27
CLDN6P56747 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.01■■□□□ 1.27
CLDN6P56747 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.01■■□□□ 1.27
CLDN6P56747 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN6P56747 AC010997.5-201ENST00000609182 354 ntBASIC23■■□□□ 1.27
CLDN6P56747 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLDN6P56747 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23■■□□□ 1.27
CLDN6P56747 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CLDN6P56747 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.99■■□□□ 1.27
CLDN6P56747 KRT18P10-201ENST00000388836 1287 ntBASIC22.99■■□□□ 1.27
CLDN6P56747 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN6P56747 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN6P56747 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CLDN6P56747 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CLDN6P56747 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN6P56747 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN6P56747 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN6P56747 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms