Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.45■■■□□ 2.63
PRIM1P49642 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.45■■■□□ 2.63
PRIM1P49642 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
PRIM1P49642 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.44■■■□□ 2.62
PRIM1P49642 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
PRIM1P49642 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.44■■■□□ 2.62
PRIM1P49642 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
PRIM1P49642 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PRIM1P49642 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PRIM1P49642 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.43■■■□□ 2.62
PRIM1P49642 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PRIM1P49642 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
PRIM1P49642 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.42■■■□□ 2.62
PRIM1P49642 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PRIM1P49642 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.41■■■□□ 2.62
PRIM1P49642 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
PRIM1P49642 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
PRIM1P49642 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PRIM1P49642 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PRIM1P49642 AC139426.1-201ENST00000568218 2529 ntBASIC31.4■■■□□ 2.62
PRIM1P49642 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PRIM1P49642 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
PRIM1P49642 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
PRIM1P49642 AL136116.3-201ENST00000402907 1138 ntBASIC31.4■■■□□ 2.62
PRIM1P49642 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PRIM1P49642 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.39■■■□□ 2.62
PRIM1P49642 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
PRIM1P49642 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.39■■■□□ 2.61
PRIM1P49642 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.38■■■□□ 2.61
PRIM1P49642 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PRIM1P49642 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.38■■■□□ 2.61
PRIM1P49642 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PRIM1P49642 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
PRIM1P49642 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
PRIM1P49642 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.37■■■□□ 2.61
PRIM1P49642 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.37■■■□□ 2.61
PRIM1P49642 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.37■■■□□ 2.61
PRIM1P49642 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.37■■■□□ 2.61
PRIM1P49642 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRIM1P49642 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRIM1P49642 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRIM1P49642 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PRIM1P49642 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PRIM1P49642 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.36■■■□□ 2.61
PRIM1P49642 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRIM1P49642 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
PRIM1P49642 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
PRIM1P49642 AC110285.6-201ENST00000617652 491 ntBASIC31.35■■■□□ 2.61
PRIM1P49642 AL117332.1-201ENST00000622628 974 ntBASIC31.35■■■□□ 2.61
PRIM1P49642 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PRIM1P49642 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
PRIM1P49642 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.34■■■□□ 2.61
PRIM1P49642 MIR4281-201ENST00000580852 62 ntBASIC31.34■■■□□ 2.61
PRIM1P49642 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
PRIM1P49642 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.33■■■□□ 2.61
PRIM1P49642 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.33■■■□□ 2.61
PRIM1P49642 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PRIM1P49642 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.33■■■□□ 2.61
PRIM1P49642 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.33■■■□□ 2.61
PRIM1P49642 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
PRIM1P49642 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRIM1P49642 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PRIM1P49642 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRIM1P49642 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRIM1P49642 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
PRIM1P49642 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
PRIM1P49642 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.32■■■□□ 2.6
PRIM1P49642 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PRIM1P49642 MIR3621-201ENST00000580529 85 ntBASIC31.31■■■□□ 2.6
PRIM1P49642 AC010997.5-201ENST00000609182 354 ntBASIC31.31■■■□□ 2.6
PRIM1P49642 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRIM1P49642 BX255925.1-201ENST00000566954 1854 ntBASIC31.31■■■□□ 2.6
PRIM1P49642 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRIM1P49642 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PRIM1P49642 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
PRIM1P49642 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.3■■■□□ 2.6
PRIM1P49642 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PRIM1P49642 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.29■■■□□ 2.6
PRIM1P49642 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
PRIM1P49642 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.28■■■□□ 2.6
PRIM1P49642 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
PRIM1P49642 AC005837.3-201ENST00000612163 286 ntBASIC31.28■■■□□ 2.6
PRIM1P49642 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.28■■■□□ 2.6
PRIM1P49642 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PRIM1P49642 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.27■■■□□ 2.6
PRIM1P49642 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PRIM1P49642 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
PRIM1P49642 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PRIM1P49642 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
PRIM1P49642 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.27■■■□□ 2.6
PRIM1P49642 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.26■■■□□ 2.59
PRIM1P49642 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PRIM1P49642 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.26■■■□□ 2.59
PRIM1P49642 MIR4466-201ENST00000606121 54 ntBASIC31.26■■■□□ 2.59
PRIM1P49642 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRIM1P49642 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRIM1P49642 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRIM1P49642 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRIM1P49642 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
PRIM1P49642 MIR6724-1-201ENST00000616420 92 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms