Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 SUP7tY(GUA)J1 75 nt5.84□□□□□ -1.47
LDB7P38210 SUP4tY(GUA)J2 75 nt5.84□□□□□ -1.47
LDB7P38210 SUP5tY(GUA)M1 75 nt5.84□□□□□ -1.47
LDB7P38210 SUP8tY(GUA)M2 75 nt5.84□□□□□ -1.47
LDB7P38210 SUP3tY(GUA)O 75 nt5.84□□□□□ -1.47
LDB7P38210 ERP2YAL007C 648 nt5.84□□□□□ -1.47
LDB7P38210 EFM3YJR129C 1020 nt5.84□□□□□ -1.47
LDB7P38210 YNR040WYNR040W 771 nt5.84□□□□□ -1.47
LDB7P38210 UBC11YOR339C 471 nt5.84□□□□□ -1.47
LDB7P38210 NME1NME1 340 nt5.84□□□□□ -1.47
LDB7P38210 YPR123CYPR123C 435 nt5.84□□□□□ -1.47
LDB7P38210 CNE1YAL058W 1509 nt5.84□□□□□ -1.48
LDB7P38210 KNS1YLL019C 2214 nt5.83□□□□□ -1.48
LDB7P38210 COR1YBL045C 1374 nt5.83□□□□□ -1.48
LDB7P38210 UGX2YDL169C 672 nt5.83□□□□□ -1.48
LDB7P38210 SUP19tS(UGA)E 82 nt5.83□□□□□ -1.48
LDB7P38210 SUP17tS(UGA)I 82 nt5.83□□□□□ -1.48
LDB7P38210 SUP16tS(UGA)P 82 nt5.83□□□□□ -1.48
LDB7P38210 MRS1YIR021W 1092 nt5.83□□□□□ -1.48
LDB7P38210 ICT1YLR099C 1185 nt5.83□□□□□ -1.48
LDB7P38210 YOL036WYOL036W 2286 nt5.83□□□□□ -1.48
LDB7P38210 HXT17YNR072W 1695 nt5.82□□□□□ -1.48
LDB7P38210 YDL022C-AYDL022C-A 249 nt5.82□□□□□ -1.48
LDB7P38210 RPN11YFR004W 921 nt5.82□□□□□ -1.48
LDB7P38210 DJP1YIR004W 1299 nt5.82□□□□□ -1.48
LDB7P38210 AVT4YNL101W 2142 nt5.82□□□□□ -1.48
LDB7P38210 IRS4YKR019C 1848 nt5.82□□□□□ -1.48
LDB7P38210 MSN2YMR037C 2115 nt5.81□□□□□ -1.48
LDB7P38210 PRP24YMR268C 1335 nt5.81□□□□□ -1.48
LDB7P38210 SPO7YAL009W 780 nt5.81□□□□□ -1.48
LDB7P38210 CIS3YJL158C 684 nt5.81□□□□□ -1.48
LDB7P38210 SEN34YAR008W 828 nt5.81□□□□□ -1.48
LDB7P38210 YNL200CYNL200C 741 nt5.81□□□□□ -1.48
LDB7P38210 IMA5YJL216C 1746 nt5.81□□□□□ -1.48
LDB7P38210 SLX5YDL013W 1860 nt5.81□□□□□ -1.48
LDB7P38210 ISN1YOR155C 1353 nt5.8□□□□□ -1.48
LDB7P38210 GIT1YCR098C 1557 nt5.8□□□□□ -1.48
LDB7P38210 YJU3YKL094W 942 nt5.8□□□□□ -1.48
LDB7P38210 AAD15YOL165C 432 nt5.8□□□□□ -1.48
LDB7P38210 ATG12YBR217W 561 nt5.8□□□□□ -1.48
LDB7P38210 APE3YBR286W 1614 nt5.8□□□□□ -1.48
LDB7P38210 MSS1YMR023C 1581 nt5.8□□□□□ -1.48
LDB7P38210 RSC2YLR357W 2670 nt5.8□□□□□ -1.48
LDB7P38210 RAD3YER171W 2337 nt5.79□□□□□ -1.48
LDB7P38210 SHP1YBL058W 1272 nt5.79□□□□□ -1.48
LDB7P38210 PAP2YOL115W 1755 nt5.79□□□□□ -1.48
LDB7P38210 YDR109CYDR109C 2148 nt5.78□□□□□ -1.48
LDB7P38210 TFC6YDR362C 2019 nt5.78□□□□□ -1.48
LDB7P38210 HAP2YGL237C 798 nt5.78□□□□□ -1.48
LDB7P38210 YOR200WYOR200W 399 nt5.78□□□□□ -1.48
LDB7P38210 RPN7YPR108W 1290 nt5.78□□□□□ -1.48
LDB7P38210 YBR144CYBR144C 315 nt5.78□□□□□ -1.48
LDB7P38210 HIS7YBR248C 1659 nt5.78□□□□□ -1.48
LDB7P38210 MRK1YDL079C 1506 nt5.78□□□□□ -1.48
LDB7P38210 PKC1YBL105C 3456 nt5.78□□□□□ -1.48
LDB7P38210 ASK1YKL052C 879 nt5.77□□□□□ -1.49
LDB7P38210 OPT1YJL212C 2400 nt5.76□□□□□ -1.49
LDB7P38210 IME2YJL106W 1938 nt5.76□□□□□ -1.49
LDB7P38210 COX9YDL067C 180 nt5.76□□□□□ -1.49
LDB7P38210 RPE1YJL121C 717 nt5.76□□□□□ -1.49
LDB7P38210 HXT2YMR011W 1626 nt5.76□□□□□ -1.49
LDB7P38210 VRP1YLR337C 2454 nt5.75□□□□□ -1.49
LDB7P38210 CEF1YMR213W 1773 nt5.75□□□□□ -1.49
LDB7P38210 GAT1YFL021W 1533 nt5.75□□□□□ -1.49
LDB7P38210 XBP1YIL101C 1944 nt5.75□□□□□ -1.49
LDB7P38210 YPK2YMR104C 2034 nt5.75□□□□□ -1.49
LDB7P38210 YPL277CYPL277C 1464 nt5.75□□□□□ -1.49
LDB7P38210 EMW1YNL313C 2715 nt5.75□□□□□ -1.49
LDB7P38210 YER186CYER186C 921 nt5.74□□□□□ -1.49
LDB7P38210 RME1YGR044C 903 nt5.74□□□□□ -1.49
LDB7P38210 VMA4YOR332W 702 nt5.74□□□□□ -1.49
LDB7P38210 RPS9AYPL081W 594 nt5.74□□□□□ -1.49
LDB7P38210 PUF3YLL013C 2640 nt5.73□□□□□ -1.49
LDB7P38210 YDL114WYDL114W 927 nt5.73□□□□□ -1.49
LDB7P38210 LYS12YIL094C 1116 nt5.73□□□□□ -1.49
LDB7P38210 NPA3YJR072C 1158 nt5.73□□□□□ -1.49
LDB7P38210 YML6YML025C 861 nt5.73□□□□□ -1.49
LDB7P38210 SNN1YNL086W 309 nt5.73□□□□□ -1.49
LDB7P38210 YBR284WYBR284W 2394 nt5.73□□□□□ -1.49
LDB7P38210 DIA3YDL024C 1407 nt5.73□□□□□ -1.49
LDB7P38210 VPS4YPR173C 1314 nt5.73□□□□□ -1.49
LDB7P38210 HSP78YDR258C 2436 nt5.72□□□□□ -1.49
LDB7P38210 PPM1YDR435C 987 nt5.72□□□□□ -1.49
LDB7P38210 YER148W-AYER148W-A 579 nt5.72□□□□□ -1.49
LDB7P38210 RPS2YGL123W 765 nt5.72□□□□□ -1.49
LDB7P38210 RRP4YHR069C 1080 nt5.72□□□□□ -1.49
LDB7P38210 EGD2YHR193C 525 nt5.72□□□□□ -1.49
LDB7P38210 YBR056C-BYBR056C-B 159 nt5.72□□□□□ -1.49
LDB7P38210 GLE1YDL207W 1617 nt5.72□□□□□ -1.49
LDB7P38210 AMD1YML035C 2433 nt5.72□□□□□ -1.49
LDB7P38210 ERC1YHR032W 1746 nt5.71□□□□□ -1.49
LDB7P38210 APS3YJL024C 585 nt5.71□□□□□ -1.5
LDB7P38210 TAL1YLR354C 1008 nt5.71□□□□□ -1.5
LDB7P38210 TFB4YPR056W 1017 nt5.71□□□□□ -1.5
LDB7P38210 SEC20YDR498C 1152 nt5.7□□□□□ -1.5
LDB7P38210 CCP1YKR066C 1086 nt5.7□□□□□ -1.5
LDB7P38210 RAP1YNL216W 2484 nt5.7□□□□□ -1.5
LDB7P38210 YDR514CYDR514C 1452 nt5.7□□□□□ -1.5
LDB7P38210 SKI2YLR398C 3864 nt5.7□□□□□ -1.5
LDB7P38210 YML082WYML082W 1950 nt5.69□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms