Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA4P35542 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SAA4P35542 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SAA4P35542 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.38■□□□□ 0.69
SAA4P35542 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.38■□□□□ 0.69
SAA4P35542 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SAA4P35542 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.38■□□□□ 0.69
SAA4P35542 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.38■□□□□ 0.69
SAA4P35542 MIR4508-201ENST00000584178 70 ntBASIC19.38■□□□□ 0.69
SAA4P35542 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SAA4P35542 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.37■□□□□ 0.69
SAA4P35542 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SAA4P35542 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SAA4P35542 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.36■□□□□ 0.69
SAA4P35542 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.36■□□□□ 0.69
SAA4P35542 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SAA4P35542 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SAA4P35542 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SAA4P35542 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.36■□□□□ 0.69
SAA4P35542 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SAA4P35542 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SAA4P35542 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SAA4P35542 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SAA4P35542 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SAA4P35542 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SAA4P35542 ERN1-208ENST00000606895 2068 ntBASIC19.36■□□□□ 0.69
SAA4P35542 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.35■□□□□ 0.69
SAA4P35542 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SAA4P35542 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA4P35542 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA4P35542 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA4P35542 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.35■□□□□ 0.69
SAA4P35542 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SAA4P35542 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA4P35542 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.35■□□□□ 0.69
SAA4P35542 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA4P35542 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SAA4P35542 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SAA4P35542 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.34■□□□□ 0.69
SAA4P35542 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SAA4P35542 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SAA4P35542 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.33■□□□□ 0.69
SAA4P35542 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SAA4P35542 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SAA4P35542 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SAA4P35542 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.33■□□□□ 0.68
SAA4P35542 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SAA4P35542 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SAA4P35542 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SAA4P35542 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA4P35542 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA4P35542 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
SAA4P35542 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA4P35542 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA4P35542 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA4P35542 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SAA4P35542 AL451085.2-201ENST00000605085 799 ntBASIC19.32■□□□□ 0.68
SAA4P35542 AC092803.2-201ENST00000564287 1899 ntBASIC19.32■□□□□ 0.68
SAA4P35542 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA4P35542 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
SAA4P35542 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SAA4P35542 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.31■□□□□ 0.68
SAA4P35542 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.31■□□□□ 0.68
SAA4P35542 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SAA4P35542 AC103724.3-201ENST00000564481 992 ntBASIC19.31■□□□□ 0.68
SAA4P35542 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.31■□□□□ 0.68
SAA4P35542 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SAA4P35542 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA4P35542 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
SAA4P35542 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SAA4P35542 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.3■□□□□ 0.68
SAA4P35542 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAA4P35542 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA4P35542 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.3■□□□□ 0.68
SAA4P35542 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA4P35542 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA4P35542 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA4P35542 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA4P35542 AC010501.1-201ENST00000606270 1962 ntBASIC19.3■□□□□ 0.68
SAA4P35542 AC096887.2-201ENST00000623443 1957 ntBASIC19.3■□□□□ 0.68
SAA4P35542 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA4P35542 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA4P35542 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SAA4P35542 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.29■□□□□ 0.68
SAA4P35542 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA4P35542 AC022616.5-201ENST00000518796 181 ntBASIC19.29■□□□□ 0.68
SAA4P35542 AL031848.2-201ENST00000607670 837 ntBASIC19.29■□□□□ 0.68
SAA4P35542 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA4P35542 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SAA4P35542 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA4P35542 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.28■□□□□ 0.68
SAA4P35542 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAA4P35542 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SAA4P35542 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAA4P35542 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAA4P35542 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.28■□□□□ 0.68
SAA4P35542 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.28■□□□□ 0.68
SAA4P35542 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SAA4P35542 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA4P35542 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms