Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL3L1P16619 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.71■□□□□ 0.75
CCL3L1P16619 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCL3L1P16619 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL3L1P16619 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL3L1P16619 AC004987.1-201ENST00000428627 508 ntBASIC19.71■□□□□ 0.75
CCL3L1P16619 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.71■□□□□ 0.75
CCL3L1P16619 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL3L1P16619 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL3L1P16619 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL3L1P16619 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL3L1P16619 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL3L1P16619 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL3L1P16619 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL3L1P16619 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCL3L1P16619 AC012354.3-201ENST00000623734 483 ntBASIC19.7■□□□□ 0.74
CCL3L1P16619 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCL3L1P16619 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL3L1P16619 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL3L1P16619 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.69■□□□□ 0.74
CCL3L1P16619 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCL3L1P16619 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL3L1P16619 ATP5G2P3-201ENST00000429083 425 ntBASIC19.69■□□□□ 0.74
CCL3L1P16619 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.69■□□□□ 0.74
CCL3L1P16619 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL3L1P16619 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.68■□□□□ 0.74
CCL3L1P16619 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCL3L1P16619 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.68■□□□□ 0.74
CCL3L1P16619 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCL3L1P16619 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL3L1P16619 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL3L1P16619 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL3L1P16619 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.67■□□□□ 0.74
CCL3L1P16619 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCL3L1P16619 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL3L1P16619 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCL3L1P16619 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL3L1P16619 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL3L1P16619 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL3L1P16619 AC097639.1-201ENST00000565519 1891 ntBASIC19.66■□□□□ 0.74
CCL3L1P16619 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL3L1P16619 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.65■□□□□ 0.74
CCL3L1P16619 TSPY13P-201ENST00000338964 914 ntBASIC19.65■□□□□ 0.74
CCL3L1P16619 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL3L1P16619 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.65■□□□□ 0.74
CCL3L1P16619 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCL3L1P16619 AL033527.3-201ENST00000566366 1196 ntBASIC19.65■□□□□ 0.74
CCL3L1P16619 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.65■□□□□ 0.74
CCL3L1P16619 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL3L1P16619 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.65■□□□□ 0.74
CCL3L1P16619 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL3L1P16619 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL3L1P16619 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL3L1P16619 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
CCL3L1P16619 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.64■□□□□ 0.73
CCL3L1P16619 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL3L1P16619 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CCL3L1P16619 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL3L1P16619 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL3L1P16619 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL3L1P16619 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL3L1P16619 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL3L1P16619 KRT18P10-201ENST00000388836 1287 ntBASIC19.63■□□□□ 0.73
CCL3L1P16619 RPS2P7-201ENST00000447334 885 ntBASIC19.63■□□□□ 0.73
CCL3L1P16619 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.63■□□□□ 0.73
CCL3L1P16619 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL3L1P16619 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL3L1P16619 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
CCL3L1P16619 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL3L1P16619 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL3L1P16619 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.62■□□□□ 0.73
CCL3L1P16619 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL3L1P16619 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL3L1P16619 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL3L1P16619 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL3L1P16619 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.61■□□□□ 0.73
CCL3L1P16619 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.61■□□□□ 0.73
CCL3L1P16619 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CCL3L1P16619 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.61■□□□□ 0.73
CCL3L1P16619 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.61■□□□□ 0.73
CCL3L1P16619 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL3L1P16619 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL3L1P16619 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms