Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL11A2P13942 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL11A2P13942 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL11A2P13942 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.91■■■□□ 2.38
COL11A2P13942 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.91■■■□□ 2.38
COL11A2P13942 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
COL11A2P13942 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.91■■■□□ 2.38
COL11A2P13942 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
COL11A2P13942 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.9■■■□□ 2.38
COL11A2P13942 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.9■■■□□ 2.38
COL11A2P13942 DRD5P2-201ENST00000421395 2012 ntBASIC29.89■■■□□ 2.38
COL11A2P13942 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.89■■■□□ 2.38
COL11A2P13942 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
COL11A2P13942 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL11A2P13942 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.87■■■□□ 2.37
COL11A2P13942 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
COL11A2P13942 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.87■■■□□ 2.37
COL11A2P13942 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.87■■■□□ 2.37
COL11A2P13942 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL11A2P13942 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
COL11A2P13942 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
COL11A2P13942 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.87■■■□□ 2.37
COL11A2P13942 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.86■■■□□ 2.37
COL11A2P13942 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.86■■■□□ 2.37
COL11A2P13942 MIR6724-1-201ENST00000616420 92 ntBASIC29.86■■■□□ 2.37
COL11A2P13942 MIR6724-2-201ENST00000616483 92 ntBASIC29.86■■■□□ 2.37
COL11A2P13942 MIR6724-4-201ENST00000617390 92 ntBASIC29.86■■■□□ 2.37
COL11A2P13942 MIR6724-3-201ENST00000622482 92 ntBASIC29.86■■■□□ 2.37
COL11A2P13942 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL11A2P13942 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
COL11A2P13942 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.85■■■□□ 2.37
COL11A2P13942 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
COL11A2P13942 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL11A2P13942 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL11A2P13942 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL11A2P13942 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL11A2P13942 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
COL11A2P13942 MIR3621-201ENST00000580529 85 ntBASIC29.85■■■□□ 2.37
COL11A2P13942 MTDHP2-201ENST00000601468 714 ntBASIC29.85■■■□□ 2.37
COL11A2P13942 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
COL11A2P13942 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL11A2P13942 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL11A2P13942 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL11A2P13942 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL11A2P13942 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.83■■■□□ 2.37
COL11A2P13942 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
COL11A2P13942 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
COL11A2P13942 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
COL11A2P13942 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.82■■■□□ 2.36
COL11A2P13942 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.82■■■□□ 2.36
COL11A2P13942 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.82■■■□□ 2.36
COL11A2P13942 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
COL11A2P13942 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
COL11A2P13942 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
COL11A2P13942 AC096631.2-201ENST00000436136 790 ntBASIC29.81■■■□□ 2.36
COL11A2P13942 AC011551.1-201ENST00000614101 683 ntBASIC29.81■■■□□ 2.36
COL11A2P13942 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL11A2P13942 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL11A2P13942 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.8■■■□□ 2.36
COL11A2P13942 AC010997.5-201ENST00000609182 354 ntBASIC29.8■■■□□ 2.36
COL11A2P13942 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL11A2P13942 LINC01003-201ENST00000564834 1764 ntBASIC29.8■■■□□ 2.36
COL11A2P13942 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.79■■■□□ 2.36
COL11A2P13942 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
COL11A2P13942 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.79■■■□□ 2.36
COL11A2P13942 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.79■■■□□ 2.36
COL11A2P13942 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL11A2P13942 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL11A2P13942 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.79■■■□□ 2.36
COL11A2P13942 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.79■■■□□ 2.36
COL11A2P13942 AC142472.1-201ENST00000612013 1741 ntBASIC29.79■■■□□ 2.36
COL11A2P13942 BX255925.1-201ENST00000566954 1854 ntBASIC29.78■■■□□ 2.36
COL11A2P13942 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL11A2P13942 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL11A2P13942 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL11A2P13942 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL11A2P13942 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL11A2P13942 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.77■■■□□ 2.36
COL11A2P13942 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL11A2P13942 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL11A2P13942 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.76■■■□□ 2.36
COL11A2P13942 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.76■■■□□ 2.36
COL11A2P13942 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
COL11A2P13942 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
COL11A2P13942 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL11A2P13942 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL11A2P13942 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL11A2P13942 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.74■■■□□ 2.35
COL11A2P13942 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
COL11A2P13942 RARRES2P6-201ENST00000567333 442 ntBASIC29.74■■■□□ 2.35
COL11A2P13942 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.74■■■□□ 2.35
COL11A2P13942 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.73■■■□□ 2.35
COL11A2P13942 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms