Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
SNRPA1P09661 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SNRPA1P09661 AL356441.2-201ENST00000443009 864 ntBASIC30.81■■■□□ 2.52
SNRPA1P09661 AC131212.1-201ENST00000613771 668 ntBASIC30.81■■■□□ 2.52
SNRPA1P09661 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.81■■■□□ 2.52
SNRPA1P09661 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.81■■■□□ 2.52
SNRPA1P09661 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.8■■■□□ 2.52
SNRPA1P09661 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SNRPA1P09661 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
SNRPA1P09661 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
SNRPA1P09661 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
SNRPA1P09661 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SNRPA1P09661 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SNRPA1P09661 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
SNRPA1P09661 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
SNRPA1P09661 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.79■■■□□ 2.52
SNRPA1P09661 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.79■■■□□ 2.52
SNRPA1P09661 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.79■■■□□ 2.52
SNRPA1P09661 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
SNRPA1P09661 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SNRPA1P09661 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNRPA1P09661 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.78■■■□□ 2.52
SNRPA1P09661 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNRPA1P09661 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.78■■■□□ 2.52
SNRPA1P09661 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNRPA1P09661 AL592295.1-201ENST00000400984 884 ntBASIC30.78■■■□□ 2.52
SNRPA1P09661 AC120024.1-201ENST00000562672 995 ntBASIC30.78■■■□□ 2.52
SNRPA1P09661 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
SNRPA1P09661 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNRPA1P09661 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
SNRPA1P09661 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.77■■■□□ 2.52
SNRPA1P09661 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
SNRPA1P09661 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
SNRPA1P09661 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.76■■■□□ 2.51
SNRPA1P09661 BX664725.1-201ENST00000438252 379 ntBASIC30.76■■■□□ 2.51
SNRPA1P09661 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SNRPA1P09661 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SNRPA1P09661 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.75■■■□□ 2.51
SNRPA1P09661 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.75■■■□□ 2.51
SNRPA1P09661 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SNRPA1P09661 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SNRPA1P09661 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.74■■■□□ 2.51
SNRPA1P09661 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SNRPA1P09661 KRT125P-201ENST00000546827 989 ntBASIC30.74■■■□□ 2.51
SNRPA1P09661 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.74■■■□□ 2.51
SNRPA1P09661 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SNRPA1P09661 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNRPA1P09661 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.73■■■□□ 2.51
SNRPA1P09661 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
SNRPA1P09661 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.73■■■□□ 2.51
SNRPA1P09661 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNRPA1P09661 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNRPA1P09661 MIR4787-201ENST00000607364 84 ntBASIC30.73■■■□□ 2.51
SNRPA1P09661 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNRPA1P09661 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.72■■■□□ 2.51
SNRPA1P09661 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
SNRPA1P09661 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SNRPA1P09661 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.72■■■□□ 2.51
SNRPA1P09661 AC137630.3-201ENST00000607245 391 ntBASIC30.72■■■□□ 2.51
SNRPA1P09661 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNRPA1P09661 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNRPA1P09661 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
SNRPA1P09661 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.71■■■□□ 2.51
SNRPA1P09661 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SNRPA1P09661 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.7■■■□□ 2.51
SNRPA1P09661 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SNRPA1P09661 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SNRPA1P09661 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.7■■■□□ 2.51
SNRPA1P09661 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SNRPA1P09661 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
SNRPA1P09661 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SNRPA1P09661 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SNRPA1P09661 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.69■■■□□ 2.5
SNRPA1P09661 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
SNRPA1P09661 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNRPA1P09661 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNRPA1P09661 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNRPA1P09661 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.68■■■□□ 2.5
SNRPA1P09661 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.68■■■□□ 2.5
SNRPA1P09661 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
SNRPA1P09661 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.68■■■□□ 2.5
SNRPA1P09661 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SNRPA1P09661 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.67■■■□□ 2.5
SNRPA1P09661 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNRPA1P09661 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNRPA1P09661 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SNRPA1P09661 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.66■■■□□ 2.5
SNRPA1P09661 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
SNRPA1P09661 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNRPA1P09661 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNRPA1P09661 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNRPA1P09661 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNRPA1P09661 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SNRPA1P09661 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SNRPA1P09661 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SNRPA1P09661 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.64■■■□□ 2.5
SNRPA1P09661 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SNRPA1P09661 AC021242.3-201ENST00000607598 1377 ntBASIC30.64■■■□□ 2.5
SNRPA1P09661 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.49
SNRPA1P09661 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms