Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPARCP09486 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPARCP09486 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPARCP09486 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPARCP09486 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.15■□□□□ 0.98
SPARCP09486 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPARCP09486 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPARCP09486 MIR639-201ENST00000384974 98 ntBASIC21.15■□□□□ 0.98
SPARCP09486 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPARCP09486 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.15■□□□□ 0.98
SPARCP09486 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPARCP09486 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SPARCP09486 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SPARCP09486 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPARCP09486 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.14■□□□□ 0.97
SPARCP09486 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPARCP09486 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPARCP09486 AC093323.1-202ENST00000635031 2045 ntBASIC21.14■□□□□ 0.97
SPARCP09486 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPARCP09486 AC097639.1-201ENST00000565519 1891 ntBASIC21.13■□□□□ 0.97
SPARCP09486 AC025884.2-201ENST00000553429 711 ntBASIC21.13■□□□□ 0.97
SPARCP09486 MIR3960-201ENST00000583311 91 ntBASIC21.13■□□□□ 0.97
SPARCP09486 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPARCP09486 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPARCP09486 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPARCP09486 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
SPARCP09486 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.12■□□□□ 0.97
SPARCP09486 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPARCP09486 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPARCP09486 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SPARCP09486 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPARCP09486 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPARCP09486 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SPARCP09486 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPARCP09486 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPARCP09486 SMPD5-203ENST00000639008 1464 ntBASIC21.11■□□□□ 0.97
SPARCP09486 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPARCP09486 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPARCP09486 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.1■□□□□ 0.97
SPARCP09486 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPARCP09486 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPARCP09486 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.1■□□□□ 0.97
SPARCP09486 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPARCP09486 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPARCP09486 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SPARCP09486 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 AC092296.2-201ENST00000589470 999 ntBASIC21.09■□□□□ 0.97
SPARCP09486 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPARCP09486 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPARCP09486 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SPARCP09486 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SPARCP09486 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SPARCP09486 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.08■□□□□ 0.96
SPARCP09486 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.07■□□□□ 0.96
SPARCP09486 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPARCP09486 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.07■□□□□ 0.96
SPARCP09486 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPARCP09486 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPARCP09486 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.07■□□□□ 0.96
SPARCP09486 AC022413.1-201ENST00000624602 984 ntBASIC21.07■□□□□ 0.96
SPARCP09486 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SPARCP09486 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPARCP09486 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPARCP09486 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPARCP09486 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
SPARCP09486 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPARCP09486 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPARCP09486 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPARCP09486 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPARCP09486 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.06■□□□□ 0.96
SPARCP09486 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPARCP09486 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.05■□□□□ 0.96
SPARCP09486 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPARCP09486 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPARCP09486 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPARCP09486 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPARCP09486 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPARCP09486 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.05■□□□□ 0.96
SPARCP09486 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.05■□□□□ 0.96
SPARCP09486 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.05■□□□□ 0.96
SPARCP09486 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.05■□□□□ 0.96
SPARCP09486 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.05■□□□□ 0.96
SPARCP09486 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPARCP09486 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SPARCP09486 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPARCP09486 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.04■□□□□ 0.96
SPARCP09486 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPARCP09486 AL139125.2-201ENST00000623134 1869 ntBASIC21.04■□□□□ 0.96
SPARCP09486 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPARCP09486 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPARCP09486 ECEL1P2-201ENST00000461596 1295 ntBASIC21.03■□□□□ 0.96
SPARCP09486 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPARCP09486 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms