Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC148477.6-201ENST00000623746 465 ntBASIC21.31■■□□□ 1
HLA-DPB1P04440 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.31■■□□□ 1
HLA-DPB1P04440 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DPB1P04440 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.31■■□□□ 1
HLA-DPB1P04440 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DPB1P04440 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
HLA-DPB1P04440 AC133561.1-201ENST00000568600 2415 ntBASIC21.3■■□□□ 1
HLA-DPB1P04440 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPB1P04440 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.3■■□□□ 1
HLA-DPB1P04440 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPB1P04440 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPB1P04440 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPB1P04440 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPB1P04440 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPB1P04440 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
HLA-DPB1P04440 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPB1P04440 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPB1P04440 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPB1P04440 AC096887.2-201ENST00000623443 1957 ntBASIC21.29■■□□□ 1
HLA-DPB1P04440 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.29■■□□□ 1
HLA-DPB1P04440 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPB1P04440 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPB1P04440 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPB1P04440 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HLA-DPB1P04440 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.28■■□□□ 1
HLA-DPB1P04440 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.28■■□□□ 1
HLA-DPB1P04440 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPB1P04440 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DPB1P04440 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.27■■□□□ 1
HLA-DPB1P04440 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.27■■□□□ 1
HLA-DPB1P04440 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DPB1P04440 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DPB1P04440 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
HLA-DPB1P04440 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DPB1P04440 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
HLA-DPB1P04440 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.26■□□□□ 0.99
HLA-DPB1P04440 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HLA-DPB1P04440 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 LINC01124-201ENST00000409786 2117 ntBASIC21.25■□□□□ 0.99
HLA-DPB1P04440 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPB1P04440 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPB1P04440 AP003733.4-201ENST00000623785 1697 ntBASIC21.24■□□□□ 0.99
HLA-DPB1P04440 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DPB1P04440 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPB1P04440 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPB1P04440 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPB1P04440 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPB1P04440 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.23■□□□□ 0.99
HLA-DPB1P04440 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPB1P04440 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPB1P04440 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPB1P04440 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HLA-DPB1P04440 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DPB1P04440 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPB1P04440 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPB1P04440 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DPB1P04440 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms