Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TOMM40O96008 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOMM40O96008 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TOMM40O96008 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.59■□□□□ 0.57
TOMM40O96008 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.59■□□□□ 0.57
TOMM40O96008 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TOMM40O96008 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.59■□□□□ 0.57
TOMM40O96008 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.59■□□□□ 0.57
TOMM40O96008 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOMM40O96008 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOMM40O96008 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TOMM40O96008 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TOMM40O96008 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
TOMM40O96008 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOMM40O96008 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOMM40O96008 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.58■□□□□ 0.56
TOMM40O96008 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.58■□□□□ 0.56
TOMM40O96008 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.58■□□□□ 0.56
TOMM40O96008 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.57■□□□□ 0.56
TOMM40O96008 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOMM40O96008 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.56■□□□□ 0.56
TOMM40O96008 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TOMM40O96008 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.56■□□□□ 0.56
TOMM40O96008 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOMM40O96008 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOMM40O96008 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOMM40O96008 AC097639.1-201ENST00000565519 1891 ntBASIC18.56■□□□□ 0.56
TOMM40O96008 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOMM40O96008 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.55■□□□□ 0.56
TOMM40O96008 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TOMM40O96008 AC138932.3-201ENST00000567634 1902 ntBASIC18.55■□□□□ 0.56
TOMM40O96008 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.55■□□□□ 0.56
TOMM40O96008 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOMM40O96008 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOMM40O96008 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TOMM40O96008 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOMM40O96008 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOMM40O96008 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 AL157400.5-201ENST00000507624 621 ntBASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.54■□□□□ 0.56
TOMM40O96008 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOMM40O96008 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOMM40O96008 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOMM40O96008 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOMM40O96008 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOMM40O96008 AC025884.2-201ENST00000553429 711 ntBASIC18.53■□□□□ 0.56
TOMM40O96008 AC060814.1-201ENST00000554326 538 ntBASIC18.53■□□□□ 0.56
TOMM40O96008 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.53■□□□□ 0.56
TOMM40O96008 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TOMM40O96008 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOMM40O96008 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOMM40O96008 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TOMM40O96008 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.52■□□□□ 0.56
TOMM40O96008 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TOMM40O96008 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TOMM40O96008 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOMM40O96008 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.52■□□□□ 0.56
TOMM40O96008 MIR3960-201ENST00000583311 91 ntBASIC18.52■□□□□ 0.56
TOMM40O96008 MIR7108-201ENST00000614319 87 ntBASIC18.52■□□□□ 0.56
TOMM40O96008 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOMM40O96008 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOMM40O96008 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOMM40O96008 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOMM40O96008 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOMM40O96008 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOMM40O96008 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOMM40O96008 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.51■□□□□ 0.55
TOMM40O96008 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOMM40O96008 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOMM40O96008 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOMM40O96008 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.51■□□□□ 0.55
TOMM40O96008 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOMM40O96008 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TOMM40O96008 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOMM40O96008 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TOMM40O96008 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TOMM40O96008 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TOMM40O96008 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TOMM40O96008 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms