Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN1O95832 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN1O95832 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN1O95832 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN1O95832 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.35■■□□□ 1.01
CLDN1O95832 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN1O95832 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.34■■□□□ 1.01
CLDN1O95832 AL117332.1-201ENST00000622628 974 ntBASIC21.34■■□□□ 1.01
CLDN1O95832 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN1O95832 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN1O95832 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN1O95832 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.33■■□□□ 1.01
CLDN1O95832 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.33■■□□□ 1.01
CLDN1O95832 ZNRF2P3-201ENST00000424200 374 ntBASIC21.33■■□□□ 1.01
CLDN1O95832 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.33■■□□□ 1.01
CLDN1O95832 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.33■■□□□ 1.01
CLDN1O95832 AC092028.1-203ENST00000608262 953 ntBASIC21.33■■□□□ 1.01
CLDN1O95832 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLDN1O95832 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDN1O95832 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLDN1O95832 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLDN1O95832 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN1O95832 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.32■■□□□ 1
CLDN1O95832 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.32■■□□□ 1
CLDN1O95832 AC133561.4-201ENST00000566112 224 ntBASIC21.32■■□□□ 1
CLDN1O95832 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN1O95832 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN1O95832 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.32■■□□□ 1
CLDN1O95832 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN1O95832 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.31■■□□□ 1
CLDN1O95832 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.31■■□□□ 1
CLDN1O95832 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLDN1O95832 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.31■■□□□ 1
CLDN1O95832 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.31■■□□□ 1
CLDN1O95832 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN1O95832 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.3■■□□□ 1
CLDN1O95832 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.3■■□□□ 1
CLDN1O95832 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN1O95832 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN1O95832 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN1O95832 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CLDN1O95832 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.29■■□□□ 1
CLDN1O95832 MIR3621-201ENST00000580529 85 ntBASIC21.29■■□□□ 1
CLDN1O95832 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN1O95832 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN1O95832 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN1O95832 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN1O95832 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.28■■□□□ 1
CLDN1O95832 AC026271.2-201ENST00000428091 497 ntBASIC21.28■■□□□ 1
CLDN1O95832 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CLDN1O95832 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.28■■□□□ 1
CLDN1O95832 MIR4466-201ENST00000606121 54 ntBASIC21.28■■□□□ 1
CLDN1O95832 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN1O95832 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
CLDN1O95832 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN1O95832 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN1O95832 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.27■■□□□ 1
CLDN1O95832 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.27■■□□□ 1
CLDN1O95832 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN1O95832 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN1O95832 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN1O95832 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN1O95832 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN1O95832 AC104564.3-201ENST00000582367 638 ntBASIC21.26■□□□□ 0.99
CLDN1O95832 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN1O95832 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN1O95832 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN1O95832 WHAMMP3-201ENST00000611636 1609 ntBASIC21.26■□□□□ 0.99
CLDN1O95832 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CLDN1O95832 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN1O95832 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN1O95832 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN1O95832 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN1O95832 AC120024.1-201ENST00000562672 995 ntBASIC21.25■□□□□ 0.99
CLDN1O95832 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN1O95832 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN1O95832 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CLDN1O95832 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CLDN1O95832 DRD5P2-201ENST00000421395 2012 ntBASIC21.24■□□□□ 0.99
CLDN1O95832 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CLDN1O95832 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN1O95832 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN1O95832 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN1O95832 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN1O95832 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN1O95832 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN1O95832 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN1O95832 AC010997.5-201ENST00000609182 354 ntBASIC21.23■□□□□ 0.99
CLDN1O95832 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN1O95832 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN1O95832 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.23■□□□□ 0.99
CLDN1O95832 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CLDN1O95832 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN1O95832 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN1O95832 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN1O95832 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CLDN1O95832 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN1O95832 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN1O95832 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CLDN1O95832 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms