Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GUSBP5-201ENST00000418136 578 ntBASIC26.99■■□□□ 1.91
GGPS1O95749 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
GGPS1O95749 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
GGPS1O95749 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
GGPS1O95749 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
GGPS1O95749 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
GGPS1O95749 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
GGPS1O95749 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.98■■□□□ 1.91
GGPS1O95749 AC022616.5-201ENST00000518796 181 ntBASIC26.98■■□□□ 1.91
GGPS1O95749 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.97■■□□□ 1.91
GGPS1O95749 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
GGPS1O95749 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
GGPS1O95749 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
GGPS1O95749 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.96■■□□□ 1.91
GGPS1O95749 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
GGPS1O95749 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
GGPS1O95749 AL121749.1-202ENST00000609313 2153 ntBASIC26.95■■□□□ 1.91
GGPS1O95749 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
GGPS1O95749 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
GGPS1O95749 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
GGPS1O95749 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.95■■□□□ 1.9
GGPS1O95749 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
GGPS1O95749 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
GGPS1O95749 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
GGPS1O95749 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
GGPS1O95749 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
GGPS1O95749 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.94■■□□□ 1.9
GGPS1O95749 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
GGPS1O95749 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
GGPS1O95749 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.94■■□□□ 1.9
GGPS1O95749 AC239859.2-201ENST00000444165 318 ntBASIC26.93■■□□□ 1.9
GGPS1O95749 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
GGPS1O95749 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
GGPS1O95749 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
GGPS1O95749 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.93■■□□□ 1.9
GGPS1O95749 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
GGPS1O95749 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
GGPS1O95749 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.92■■□□□ 1.9
GGPS1O95749 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.92■■□□□ 1.9
GGPS1O95749 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.92■■□□□ 1.9
GGPS1O95749 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GGPS1O95749 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
GGPS1O95749 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GGPS1O95749 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GGPS1O95749 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
GGPS1O95749 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.91■■□□□ 1.9
GGPS1O95749 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GGPS1O95749 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.9■■□□□ 1.9
GGPS1O95749 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.9■■□□□ 1.9
GGPS1O95749 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.9■■□□□ 1.9
GGPS1O95749 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.9■■□□□ 1.9
GGPS1O95749 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
GGPS1O95749 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
GGPS1O95749 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
GGPS1O95749 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
GGPS1O95749 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.89■■□□□ 1.9
GGPS1O95749 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.89■■□□□ 1.9
GGPS1O95749 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.89■■□□□ 1.89
GGPS1O95749 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
GGPS1O95749 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
GGPS1O95749 KRT18P24-201ENST00000344739 1156 ntBASIC26.88■■□□□ 1.89
GGPS1O95749 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.88■■□□□ 1.89
GGPS1O95749 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
GGPS1O95749 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.87■■□□□ 1.89
GGPS1O95749 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
GGPS1O95749 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
GGPS1O95749 Z92544.1-202ENST00000571933 1220 ntBASIC26.87■■□□□ 1.89
GGPS1O95749 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.87■■□□□ 1.89
GGPS1O95749 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
GGPS1O95749 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.86■■□□□ 1.89
GGPS1O95749 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
GGPS1O95749 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.86■■□□□ 1.89
GGPS1O95749 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.86■■□□□ 1.89
GGPS1O95749 THA1P-201ENST00000590384 1145 ntBASIC26.86■■□□□ 1.89
GGPS1O95749 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.86■■□□□ 1.89
GGPS1O95749 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
GGPS1O95749 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.86■■□□□ 1.89
GGPS1O95749 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
GGPS1O95749 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
GGPS1O95749 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
GGPS1O95749 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
GGPS1O95749 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.85■■□□□ 1.89
GGPS1O95749 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
GGPS1O95749 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
GGPS1O95749 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
GGPS1O95749 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
GGPS1O95749 AC120024.1-201ENST00000562672 995 ntBASIC26.84■■□□□ 1.89
GGPS1O95749 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
GGPS1O95749 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
GGPS1O95749 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.84■■□□□ 1.89
GGPS1O95749 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
GGPS1O95749 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
GGPS1O95749 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
GGPS1O95749 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
GGPS1O95749 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.83■■□□□ 1.89
GGPS1O95749 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
GGPS1O95749 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
GGPS1O95749 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
GGPS1O95749 AC131212.1-201ENST00000613771 668 ntBASIC26.82■■□□□ 1.88
GGPS1O95749 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms