Protein–RNA interactions for Protein: O75525

KHDRBS3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, humanhuman

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3O75525 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.36■■□□□ 1.01
KHDRBS3O75525 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDRBS3O75525 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.35■■□□□ 1.01
KHDRBS3O75525 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KHDRBS3O75525 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KHDRBS3O75525 MIR3960-201ENST00000583311 91 ntBASIC21.35■■□□□ 1.01
KHDRBS3O75525 AC022413.1-201ENST00000624602 984 ntBASIC21.35■■□□□ 1.01
KHDRBS3O75525 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KHDRBS3O75525 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KHDRBS3O75525 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KHDRBS3O75525 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KHDRBS3O75525 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.34■■□□□ 1.01
KHDRBS3O75525 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KHDRBS3O75525 SMPD5-203ENST00000639008 1464 ntBASIC21.34■■□□□ 1.01
KHDRBS3O75525 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KHDRBS3O75525 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
KHDRBS3O75525 AC092296.2-201ENST00000589470 999 ntBASIC21.34■■□□□ 1.01
KHDRBS3O75525 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KHDRBS3O75525 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
KHDRBS3O75525 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KHDRBS3O75525 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KHDRBS3O75525 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
KHDRBS3O75525 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
KHDRBS3O75525 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
KHDRBS3O75525 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KHDRBS3O75525 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.33■■□□□ 1
KHDRBS3O75525 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
KHDRBS3O75525 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.32■■□□□ 1
KHDRBS3O75525 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 ECEL1P2-201ENST00000461596 1295 ntBASIC21.32■■□□□ 1
KHDRBS3O75525 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
KHDRBS3O75525 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KHDRBS3O75525 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KHDRBS3O75525 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
KHDRBS3O75525 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.31■■□□□ 1
KHDRBS3O75525 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.31■■□□□ 1
KHDRBS3O75525 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KHDRBS3O75525 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.31■■□□□ 1
KHDRBS3O75525 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KHDRBS3O75525 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.31■■□□□ 1
KHDRBS3O75525 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.31■■□□□ 1
KHDRBS3O75525 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KHDRBS3O75525 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KHDRBS3O75525 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.29■■□□□ 1
KHDRBS3O75525 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KHDRBS3O75525 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.29■■□□□ 1
KHDRBS3O75525 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KHDRBS3O75525 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KHDRBS3O75525 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.28■■□□□ 1
KHDRBS3O75525 MIR4449-201ENST00000578365 66 ntBASIC21.28■■□□□ 1
KHDRBS3O75525 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.28■■□□□ 1
KHDRBS3O75525 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KHDRBS3O75525 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KHDRBS3O75525 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.28■■□□□ 1
KHDRBS3O75525 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KHDRBS3O75525 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
KHDRBS3O75525 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.27■■□□□ 1
KHDRBS3O75525 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
KHDRBS3O75525 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KHDRBS3O75525 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KHDRBS3O75525 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.27■■□□□ 1
KHDRBS3O75525 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
KHDRBS3O75525 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
KHDRBS3O75525 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
KHDRBS3O75525 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
KHDRBS3O75525 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
KHDRBS3O75525 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.26■□□□□ 0.99
KHDRBS3O75525 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KHDRBS3O75525 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KHDRBS3O75525 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KHDRBS3O75525 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.25■□□□□ 0.99
KHDRBS3O75525 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KHDRBS3O75525 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDRBS3O75525 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.25■□□□□ 0.99
KHDRBS3O75525 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KHDRBS3O75525 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
KHDRBS3O75525 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KHDRBS3O75525 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.24■□□□□ 0.99
KHDRBS3O75525 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.24■□□□□ 0.99
KHDRBS3O75525 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.24■□□□□ 0.99
KHDRBS3O75525 RP9P-202ENST00000450133 1212 ntBASIC21.24■□□□□ 0.99
KHDRBS3O75525 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDRBS3O75525 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms