Protein–RNA interactions for Protein: O60812

HNRNPCL1, Heterogeneous nuclear ribonucleoprotein C-like 1, humanhuman

Known RBP Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL1O60812 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HNRNPCL1O60812 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.34■■□□□ 1.33
HNRNPCL1O60812 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HNRNPCL1O60812 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HNRNPCL1O60812 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.33■■□□□ 1.33
HNRNPCL1O60812 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HNRNPCL1O60812 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HNRNPCL1O60812 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.32■■□□□ 1.32
HNRNPCL1O60812 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HNRNPCL1O60812 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HNRNPCL1O60812 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HNRNPCL1O60812 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.31■■□□□ 1.32
HNRNPCL1O60812 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HNRNPCL1O60812 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HNRNPCL1O60812 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.3■■□□□ 1.32
HNRNPCL1O60812 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
HNRNPCL1O60812 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
HNRNPCL1O60812 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.29■■□□□ 1.32
HNRNPCL1O60812 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HNRNPCL1O60812 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
HNRNPCL1O60812 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HNRNPCL1O60812 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HNRNPCL1O60812 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HNRNPCL1O60812 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HNRNPCL1O60812 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HNRNPCL1O60812 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HNRNPCL1O60812 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HNRNPCL1O60812 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL1O60812 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HNRNPCL1O60812 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
HNRNPCL1O60812 AC021231.2-201ENST00000594613 730 ntBASIC23.26■■□□□ 1.31
HNRNPCL1O60812 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.26■■□□□ 1.31
HNRNPCL1O60812 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
HNRNPCL1O60812 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HNRNPCL1O60812 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
HNRNPCL1O60812 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.25■■□□□ 1.31
HNRNPCL1O60812 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL1O60812 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL1O60812 AC110285.7-201ENST00000624417 1536 ntBASIC23.25■■□□□ 1.31
HNRNPCL1O60812 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL1O60812 DUX4L29-201ENST00000425409 679 ntBASIC23.25■■□□□ 1.31
HNRNPCL1O60812 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL1O60812 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL1O60812 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL1O60812 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HNRNPCL1O60812 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
HNRNPCL1O60812 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HNRNPCL1O60812 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HNRNPCL1O60812 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HNRNPCL1O60812 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
HNRNPCL1O60812 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.24■■□□□ 1.31
HNRNPCL1O60812 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HNRNPCL1O60812 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
HNRNPCL1O60812 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HNRNPCL1O60812 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HNRNPCL1O60812 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HNRNPCL1O60812 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HNRNPCL1O60812 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.22■■□□□ 1.31
HNRNPCL1O60812 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.22■■□□□ 1.31
HNRNPCL1O60812 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL1O60812 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
HNRNPCL1O60812 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HNRNPCL1O60812 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.19■■□□□ 1.3
HNRNPCL1O60812 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms