Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSSCA1O60232 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SSSCA1O60232 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSSCA1O60232 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SSSCA1O60232 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSSCA1O60232 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SSSCA1O60232 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSSCA1O60232 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSSCA1O60232 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSSCA1O60232 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSSCA1O60232 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.36■□□□□ 0.69
SSSCA1O60232 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSSCA1O60232 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SSSCA1O60232 AC068473.5-201ENST00000616428 2072 ntBASIC19.36■□□□□ 0.69
SSSCA1O60232 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SSSCA1O60232 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.35■□□□□ 0.69
SSSCA1O60232 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SSSCA1O60232 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSSCA1O60232 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSSCA1O60232 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSSCA1O60232 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.34■□□□□ 0.69
SSSCA1O60232 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSSCA1O60232 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSSCA1O60232 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSSCA1O60232 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.34■□□□□ 0.69
SSSCA1O60232 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.34■□□□□ 0.69
SSSCA1O60232 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SSSCA1O60232 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSSCA1O60232 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SSSCA1O60232 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSSCA1O60232 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSSCA1O60232 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSSCA1O60232 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.33■□□□□ 0.68
SSSCA1O60232 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSSCA1O60232 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSSCA1O60232 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.33■□□□□ 0.68
SSSCA1O60232 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSSCA1O60232 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSSCA1O60232 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSSCA1O60232 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSSCA1O60232 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSSCA1O60232 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSSCA1O60232 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.32■□□□□ 0.68
SSSCA1O60232 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.32■□□□□ 0.68
SSSCA1O60232 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.32■□□□□ 0.68
SSSCA1O60232 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSSCA1O60232 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSSCA1O60232 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSSCA1O60232 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSSCA1O60232 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSSCA1O60232 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSSCA1O60232 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.31■□□□□ 0.68
SSSCA1O60232 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SSSCA1O60232 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSSCA1O60232 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.31■□□□□ 0.68
SSSCA1O60232 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SSSCA1O60232 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SSSCA1O60232 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSSCA1O60232 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSSCA1O60232 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSSCA1O60232 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.3■□□□□ 0.68
SSSCA1O60232 LINC00543-201ENST00000567234 1845 ntBASIC19.3■□□□□ 0.68
SSSCA1O60232 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSSCA1O60232 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSSCA1O60232 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.29■□□□□ 0.68
SSSCA1O60232 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.29■□□□□ 0.68
SSSCA1O60232 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSSCA1O60232 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.28■□□□□ 0.68
SSSCA1O60232 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSSCA1O60232 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSSCA1O60232 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSSCA1O60232 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SSSCA1O60232 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSSCA1O60232 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SSSCA1O60232 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.28■□□□□ 0.68
SSSCA1O60232 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.28■□□□□ 0.68
SSSCA1O60232 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SSSCA1O60232 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SSSCA1O60232 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.27■□□□□ 0.68
SSSCA1O60232 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSSCA1O60232 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SSSCA1O60232 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSSCA1O60232 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.27■□□□□ 0.67
SSSCA1O60232 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SSSCA1O60232 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SSSCA1O60232 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms