Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.05■■□□□ 1.92
MSH4O15457 PVT1_1.1-201ENST00000615125 194 ntBASIC27.05■■□□□ 1.92
MSH4O15457 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
MSH4O15457 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
MSH4O15457 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MSH4O15457 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MSH4O15457 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
MSH4O15457 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
MSH4O15457 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.04■■□□□ 1.92
MSH4O15457 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.04■■□□□ 1.92
MSH4O15457 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.03■■□□□ 1.92
MSH4O15457 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
MSH4O15457 AC074183.2-201ENST00000623112 922 ntBASIC27.03■■□□□ 1.92
MSH4O15457 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.03■■□□□ 1.92
MSH4O15457 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
MSH4O15457 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.02■■□□□ 1.92
MSH4O15457 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
MSH4O15457 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
MSH4O15457 DUSP8P4-201ENST00000399538 1761 ntBASIC27.02■■□□□ 1.92
MSH4O15457 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
MSH4O15457 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
MSH4O15457 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
MSH4O15457 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27■■□□□ 1.91
MSH4O15457 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27■■□□□ 1.91
MSH4O15457 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27■■□□□ 1.91
MSH4O15457 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MSH4O15457 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MSH4O15457 LONRF2P2-201ENST00000439212 571 ntBASIC27■■□□□ 1.91
MSH4O15457 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MSH4O15457 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MSH4O15457 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
MSH4O15457 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
MSH4O15457 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.99■■□□□ 1.91
MSH4O15457 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
MSH4O15457 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.99■■□□□ 1.91
MSH4O15457 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
MSH4O15457 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
MSH4O15457 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
MSH4O15457 AC145676.1-201ENST00000514988 2004 ntBASIC26.97■■□□□ 1.91
MSH4O15457 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
MSH4O15457 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.97■■□□□ 1.91
MSH4O15457 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
MSH4O15457 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.97■■□□□ 1.91
MSH4O15457 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.97■■□□□ 1.91
MSH4O15457 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
MSH4O15457 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
MSH4O15457 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.96■■□□□ 1.91
MSH4O15457 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.96■■□□□ 1.91
MSH4O15457 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.96■■□□□ 1.91
MSH4O15457 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
MSH4O15457 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
MSH4O15457 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
MSH4O15457 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.95■■□□□ 1.9
MSH4O15457 AC019171.1-201ENST00000601251 1056 ntBASIC26.95■■□□□ 1.9
MSH4O15457 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
MSH4O15457 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MSH4O15457 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
MSH4O15457 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH4O15457 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
MSH4O15457 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
MSH4O15457 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.94■■□□□ 1.9
MSH4O15457 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.94■■□□□ 1.9
MSH4O15457 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MSH4O15457 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MSH4O15457 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.93■■□□□ 1.9
MSH4O15457 AC103834.1-201ENST00000520383 144 ntBASIC26.93■■□□□ 1.9
MSH4O15457 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MSH4O15457 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
MSH4O15457 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
MSH4O15457 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
MSH4O15457 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MSH4O15457 RARRES2P1-201ENST00000474487 481 ntBASIC26.92■■□□□ 1.9
MSH4O15457 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.92■■□□□ 1.9
MSH4O15457 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
MSH4O15457 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MSH4O15457 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MSH4O15457 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH4O15457 KRT8P33-201ENST00000508125 1423 ntBASIC26.9■■□□□ 1.9
MSH4O15457 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MSH4O15457 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.9■■□□□ 1.9
MSH4O15457 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
MSH4O15457 AC097639.1-201ENST00000565519 1891 ntBASIC26.9■■□□□ 1.9
MSH4O15457 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
MSH4O15457 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MSH4O15457 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.9■■□□□ 1.9
MSH4O15457 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.9■■□□□ 1.9
MSH4O15457 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MSH4O15457 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH4O15457 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
MSH4O15457 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.89■■□□□ 1.9
MSH4O15457 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
MSH4O15457 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
MSH4O15457 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.88■■□□□ 1.89
MSH4O15457 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MSH4O15457 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.88■■□□□ 1.89
MSH4O15457 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
MSH4O15457 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.88■■□□□ 1.89
MSH4O15457 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
MSH4O15457 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
MSH4O15457 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms