Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.07■■□□□ 1.44
MID1O15344 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
MID1O15344 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
MID1O15344 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
MID1O15344 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
MID1O15344 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
MID1O15344 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
MID1O15344 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
MID1O15344 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.06■■□□□ 1.44
MID1O15344 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.06■■□□□ 1.44
MID1O15344 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
MID1O15344 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
MID1O15344 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.06■■□□□ 1.44
MID1O15344 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
MID1O15344 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MID1O15344 AC239859.2-201ENST00000444165 318 ntBASIC24.04■■□□□ 1.44
MID1O15344 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.04■■□□□ 1.44
MID1O15344 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MID1O15344 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
MID1O15344 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MID1O15344 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.03■■□□□ 1.44
MID1O15344 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.03■■□□□ 1.44
MID1O15344 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.03■■□□□ 1.44
MID1O15344 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MID1O15344 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MID1O15344 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
MID1O15344 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
MID1O15344 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.02■■□□□ 1.44
MID1O15344 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MID1O15344 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.02■■□□□ 1.44
MID1O15344 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.02■■□□□ 1.44
MID1O15344 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.02■■□□□ 1.44
MID1O15344 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.02■■□□□ 1.44
MID1O15344 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
MID1O15344 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
MID1O15344 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.02■■□□□ 1.44
MID1O15344 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
MID1O15344 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
MID1O15344 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.01■■□□□ 1.43
MID1O15344 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.01■■□□□ 1.43
MID1O15344 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
MID1O15344 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.01■■□□□ 1.43
MID1O15344 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
MID1O15344 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.01■■□□□ 1.43
MID1O15344 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
MID1O15344 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.01■■□□□ 1.43
MID1O15344 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24■■□□□ 1.43
MID1O15344 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24■■□□□ 1.43
MID1O15344 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
MID1O15344 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24■■□□□ 1.43
MID1O15344 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
MID1O15344 KRT18P24-201ENST00000344739 1156 ntBASIC23.99■■□□□ 1.43
MID1O15344 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.99■■□□□ 1.43
MID1O15344 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MID1O15344 Z92544.1-202ENST00000571933 1220 ntBASIC23.99■■□□□ 1.43
MID1O15344 THA1P-201ENST00000590384 1145 ntBASIC23.99■■□□□ 1.43
MID1O15344 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MID1O15344 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.99■■□□□ 1.43
MID1O15344 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MID1O15344 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
MID1O15344 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MID1O15344 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MID1O15344 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
MID1O15344 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
MID1O15344 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
MID1O15344 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
MID1O15344 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.97■■□□□ 1.43
MID1O15344 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.97■■□□□ 1.43
MID1O15344 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
MID1O15344 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.97■■□□□ 1.43
MID1O15344 AC120024.1-201ENST00000562672 995 ntBASIC23.97■■□□□ 1.43
MID1O15344 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
MID1O15344 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
MID1O15344 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
MID1O15344 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MID1O15344 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MID1O15344 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
MID1O15344 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
MID1O15344 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
MID1O15344 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MID1O15344 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.96■■□□□ 1.43
MID1O15344 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MID1O15344 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
MID1O15344 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
MID1O15344 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MID1O15344 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MID1O15344 AL592295.1-201ENST00000400984 884 ntBASIC23.94■■□□□ 1.42
MID1O15344 AC131212.1-201ENST00000613771 668 ntBASIC23.94■■□□□ 1.42
MID1O15344 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MID1O15344 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MID1O15344 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
MID1O15344 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MID1O15344 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.93■■□□□ 1.42
MID1O15344 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MID1O15344 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MID1O15344 BX664725.1-201ENST00000438252 379 ntBASIC23.93■■□□□ 1.42
MID1O15344 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
MID1O15344 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MID1O15344 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MID1O15344 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms