Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
PIK3C2AO00443 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
PIK3C2AO00443 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.69■■■□□ 2.82
PIK3C2AO00443 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
PIK3C2AO00443 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
PIK3C2AO00443 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PIK3C2AO00443 AC021242.3-201ENST00000607598 1377 ntBASIC32.69■■■□□ 2.82
PIK3C2AO00443 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
PIK3C2AO00443 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.69■■■□□ 2.82
PIK3C2AO00443 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PIK3C2AO00443 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PIK3C2AO00443 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PIK3C2AO00443 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.68■■■□□ 2.82
PIK3C2AO00443 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
PIK3C2AO00443 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PIK3C2AO00443 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PIK3C2AO00443 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC32.67■■■□□ 2.82
PIK3C2AO00443 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC32.67■■■□□ 2.82
PIK3C2AO00443 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PIK3C2AO00443 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PIK3C2AO00443 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC32.66■■■□□ 2.82
PIK3C2AO00443 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PIK3C2AO00443 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.66■■■□□ 2.82
PIK3C2AO00443 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PIK3C2AO00443 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PIK3C2AO00443 AP004609.3-201ENST00000610705 1884 ntBASIC32.65■■■□□ 2.82
PIK3C2AO00443 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PIK3C2AO00443 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PIK3C2AO00443 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
PIK3C2AO00443 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.65■■■□□ 2.82
PIK3C2AO00443 AC131281.2-201ENST00000520478 145 ntBASIC32.65■■■□□ 2.82
PIK3C2AO00443 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
PIK3C2AO00443 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
PIK3C2AO00443 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.64■■■□□ 2.82
PIK3C2AO00443 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.64■■■□□ 2.82
PIK3C2AO00443 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
PIK3C2AO00443 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.63■■■□□ 2.81
PIK3C2AO00443 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PIK3C2AO00443 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PIK3C2AO00443 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC32.63■■■□□ 2.81
PIK3C2AO00443 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PIK3C2AO00443 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.62■■■□□ 2.81
PIK3C2AO00443 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.62■■■□□ 2.81
PIK3C2AO00443 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PIK3C2AO00443 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PIK3C2AO00443 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PIK3C2AO00443 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PIK3C2AO00443 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
PIK3C2AO00443 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
PIK3C2AO00443 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.6■■■□□ 2.81
PIK3C2AO00443 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.6■■■□□ 2.81
PIK3C2AO00443 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.59■■■□□ 2.81
PIK3C2AO00443 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC32.59■■■□□ 2.81
PIK3C2AO00443 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.59■■■□□ 2.81
PIK3C2AO00443 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
PIK3C2AO00443 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC32.58■■■□□ 2.81
PIK3C2AO00443 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PIK3C2AO00443 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.58■■■□□ 2.81
PIK3C2AO00443 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
PIK3C2AO00443 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PIK3C2AO00443 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.57■■■□□ 2.8
PIK3C2AO00443 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
PIK3C2AO00443 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC32.57■■■□□ 2.8
PIK3C2AO00443 AC008406.3-201ENST00000620001 1374 ntBASIC32.57■■■□□ 2.8
PIK3C2AO00443 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PIK3C2AO00443 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.56■■■□□ 2.8
PIK3C2AO00443 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PIK3C2AO00443 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PIK3C2AO00443 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.55■■■□□ 2.8
PIK3C2AO00443 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.55■■■□□ 2.8
PIK3C2AO00443 TSPY9P-201ENST00000440215 945 ntBASIC32.55■■■□□ 2.8
PIK3C2AO00443 TSPY11P-201ENST00000442607 1045 ntBASIC32.55■■■□□ 2.8
PIK3C2AO00443 AC011551.1-201ENST00000614101 683 ntBASIC32.55■■■□□ 2.8
PIK3C2AO00443 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
PIK3C2AO00443 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32.54■■■□□ 2.8
PIK3C2AO00443 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.54■■■□□ 2.8
PIK3C2AO00443 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.53■■■□□ 2.8
PIK3C2AO00443 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.53■■■□□ 2.8
PIK3C2AO00443 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PIK3C2AO00443 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
PIK3C2AO00443 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PIK3C2AO00443 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PIK3C2AO00443 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.52■■■□□ 2.8
PIK3C2AO00443 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.52■■■□□ 2.8
PIK3C2AO00443 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
PIK3C2AO00443 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
PIK3C2AO00443 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC32.51■■■□□ 2.79
PIK3C2AO00443 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.51■■■□□ 2.79
PIK3C2AO00443 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
PIK3C2AO00443 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PIK3C2AO00443 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PIK3C2AO00443 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PIK3C2AO00443 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PIK3C2AO00443 AC092028.1-203ENST00000608262 953 ntBASIC32.5■■■□□ 2.79
PIK3C2AO00443 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.5■■■□□ 2.79
PIK3C2AO00443 TRIR-202ENST00000588213 841 ntTSL 3 BASIC32.5■■■□□ 2.79
PIK3C2AO00443 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
PIK3C2AO00443 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
PIK3C2AO00443 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
PIK3C2AO00443 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.48■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms