Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SIRPB1O00241 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SIRPB1O00241 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.11■□□□□ 0.81
SIRPB1O00241 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.11■□□□□ 0.81
SIRPB1O00241 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
SIRPB1O00241 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SIRPB1O00241 AC093536.1-201ENST00000569153 554 ntBASIC20.11■□□□□ 0.81
SIRPB1O00241 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.1■□□□□ 0.81
SIRPB1O00241 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SIRPB1O00241 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIRPB1O00241 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPB1O00241 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SIRPB1O00241 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.09■□□□□ 0.81
SIRPB1O00241 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPB1O00241 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SIRPB1O00241 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPB1O00241 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.09■□□□□ 0.81
SIRPB1O00241 AC007029.1-201ENST00000604183 313 ntBASIC20.09■□□□□ 0.81
SIRPB1O00241 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPB1O00241 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPB1O00241 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIRPB1O00241 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SIRPB1O00241 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIRPB1O00241 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIRPB1O00241 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIRPB1O00241 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
SIRPB1O00241 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIRPB1O00241 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.08■□□□□ 0.8
SIRPB1O00241 AC097639.1-201ENST00000565519 1891 ntBASIC20.07■□□□□ 0.8
SIRPB1O00241 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.07■□□□□ 0.8
SIRPB1O00241 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SIRPB1O00241 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPB1O00241 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.07■□□□□ 0.8
SIRPB1O00241 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.07■□□□□ 0.8
SIRPB1O00241 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPB1O00241 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIRPB1O00241 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.06■□□□□ 0.8
SIRPB1O00241 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SIRPB1O00241 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIRPB1O00241 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.06■□□□□ 0.8
SIRPB1O00241 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIRPB1O00241 AC022211.4-201ENST00000625094 2161 ntBASIC20.05■□□□□ 0.8
SIRPB1O00241 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPB1O00241 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPB1O00241 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPB1O00241 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SIRPB1O00241 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPB1O00241 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPB1O00241 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SIRPB1O00241 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPB1O00241 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIRPB1O00241 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPB1O00241 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPB1O00241 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPB1O00241 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPB1O00241 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPB1O00241 AC142381.3-201ENST00000568208 1670 ntBASIC20.03■□□□□ 0.8
SIRPB1O00241 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SIRPB1O00241 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.03■□□□□ 0.8
SIRPB1O00241 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPB1O00241 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.03■□□□□ 0.8
SIRPB1O00241 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPB1O00241 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIRPB1O00241 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIRPB1O00241 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.02■□□□□ 0.8
SIRPB1O00241 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIRPB1O00241 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.02■□□□□ 0.8
SIRPB1O00241 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.02■□□□□ 0.8
SIRPB1O00241 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SIRPB1O00241 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIRPB1O00241 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
SIRPB1O00241 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.02■□□□□ 0.8
SIRPB1O00241 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.02■□□□□ 0.79
SIRPB1O00241 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIRPB1O00241 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.01■□□□□ 0.79
SIRPB1O00241 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.01■□□□□ 0.79
SIRPB1O00241 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPB1O00241 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPB1O00241 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SIRPB1O00241 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIRPB1O00241 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPB1O00241 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPB1O00241 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPB1O00241 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SIRPB1O00241 AC138932.3-201ENST00000567634 1902 ntBASIC20■□□□□ 0.79
SIRPB1O00241 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPB1O00241 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.99■□□□□ 0.79
SIRPB1O00241 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPB1O00241 RNF126P1-201ENST00000567452 1320 ntBASIC19.99■□□□□ 0.79
SIRPB1O00241 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPB1O00241 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms