Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF223E7ERA6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RNF223E7ERA6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF223E7ERA6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RNF223E7ERA6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF223E7ERA6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF223E7ERA6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF223E7ERA6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF223E7ERA6 AL136116.3-201ENST00000402907 1138 ntBASIC19.98■□□□□ 0.79
RNF223E7ERA6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF223E7ERA6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF223E7ERA6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RNF223E7ERA6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF223E7ERA6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF223E7ERA6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF223E7ERA6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.96■□□□□ 0.79
RNF223E7ERA6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF223E7ERA6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF223E7ERA6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF223E7ERA6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF223E7ERA6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF223E7ERA6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF223E7ERA6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF223E7ERA6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF223E7ERA6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RNF223E7ERA6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF223E7ERA6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF223E7ERA6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF223E7ERA6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF223E7ERA6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF223E7ERA6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF223E7ERA6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF223E7ERA6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF223E7ERA6 MIR4281-201ENST00000580852 62 ntBASIC19.94■□□□□ 0.78
RNF223E7ERA6 AC010997.5-201ENST00000609182 354 ntBASIC19.94■□□□□ 0.78
RNF223E7ERA6 BX255925.1-201ENST00000566954 1854 ntBASIC19.94■□□□□ 0.78
RNF223E7ERA6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF223E7ERA6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF223E7ERA6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF223E7ERA6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF223E7ERA6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF223E7ERA6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF223E7ERA6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF223E7ERA6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF223E7ERA6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF223E7ERA6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RNF223E7ERA6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF223E7ERA6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.92■□□□□ 0.78
RNF223E7ERA6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF223E7ERA6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF223E7ERA6 AL117332.1-201ENST00000622628 974 ntBASIC19.92■□□□□ 0.78
RNF223E7ERA6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNF223E7ERA6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF223E7ERA6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF223E7ERA6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF223E7ERA6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF223E7ERA6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF223E7ERA6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RNF223E7ERA6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF223E7ERA6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RNF223E7ERA6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF223E7ERA6 MTDHP2-201ENST00000601468 714 ntBASIC19.91■□□□□ 0.78
RNF223E7ERA6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF223E7ERA6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF223E7ERA6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF223E7ERA6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF223E7ERA6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF223E7ERA6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF223E7ERA6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF223E7ERA6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF223E7ERA6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RNF223E7ERA6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF223E7ERA6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF223E7ERA6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF223E7ERA6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RNF223E7ERA6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF223E7ERA6 DRD5P2-201ENST00000421395 2012 ntBASIC19.89■□□□□ 0.77
RNF223E7ERA6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF223E7ERA6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF223E7ERA6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF223E7ERA6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF223E7ERA6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF223E7ERA6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF223E7ERA6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF223E7ERA6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF223E7ERA6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF223E7ERA6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF223E7ERA6 MIR6724-1-201ENST00000616420 92 ntBASIC19.88■□□□□ 0.77
RNF223E7ERA6 MIR6724-2-201ENST00000616483 92 ntBASIC19.88■□□□□ 0.77
RNF223E7ERA6 MIR6724-4-201ENST00000617390 92 ntBASIC19.88■□□□□ 0.77
RNF223E7ERA6 MIR6724-3-201ENST00000622482 92 ntBASIC19.88■□□□□ 0.77
RNF223E7ERA6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF223E7ERA6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF223E7ERA6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF223E7ERA6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF223E7ERA6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF223E7ERA6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF223E7ERA6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF223E7ERA6 MIR3621-201ENST00000580529 85 ntBASIC19.87■□□□□ 0.77
RNF223E7ERA6 AL356740.2-201ENST00000601559 647 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms